Gene A2cp1_4371 details

Gene Information

• Locus tag: A2cp1_4371
• ID: 7299534
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: -
• Start bp: 4863673
• End bp: 4865541
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 79%
• IMG OID: 643597177
• Product: superfamily I DNA and RNA helicase
• Protein accession: YP_002494754
• Protein GI: 220919450
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1112] Superfamily I DNA and RNA helicases and helicase subunits
• TIGRFAM ID: [TIGR00376] DNA helicase, putative

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.438014
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGACCTCA CGCACCACCT CGACCGCCTC GCCGCGCTGC TCGCCGCCGA GCGCGAGGAG 
GAGCGCGCCC GCTTCGCGGA GGCGAAGGGC CGGCTCTCGC TCGCCGAGCG CGAGGCGCGC 
GGGCTGGCCA TCGCCGACGT GGAGGCGCAG GACGAGGGCG CGCTGGCCGG TCGCGCGCTG 
GTGACGTTCG GGCGCGGCGG GCGCCCGCTG CCGGGCGGGC GGATCGGCGC GGGGAGCCTC 
GTGTCGGTGG CGCAGCGCCG CGACACGCCG CCGGACGCCC CGCAGGGCGT GGTGGCCCGG 
CGCACGCGCA CCGCGGTGGC GGTGGCGTTC GACGAGCCGC CGCCGGACTG GGTCACCGAC 
GGCCGGGTGG TGCTGGAGCT CGAGCCGTCC CCGGTCACCT GGGAGCGCCT CTCCGGCGGC 
CTGCGCCGCC TCCGCGACGA CCGCGCCGGG AAGCGCTGGC ACGCGGTGCT CGCGCCCGGC 
TCCGGCGCCC CGCCGCGCTT CCTGCGGGCG CCTCGCGGCC CGGTGCTGGA GGCGCGGCTC 
AACCCCGAGC AGCAGGCGGC GCTCGACCTC GCCGACCGCG CCGAGGACCT CGCGCTCGTG 
CACGGGCCGC CCGGCACGGG CAAGACGACC GTGCTCGTGG AGGTGATCCG CCGCGCCGCC 
GCCCGCGGCG AGAGCGTGCT CGCGGCCGCG CCCTCCAACC TCGCGGTGGA CAACCTGGTG 
GAGCGGCTTG CCGCCGCCGG CCTCGCCTGC GTGCGGGTGG GCCACCCGGC GCGCGTGCTC 
CCGGGCCTGC TCGAGCACAC GCTCGAGGCG CGGGTGGAGG CGCACGAGGC GGCGCGGATC 
GCGCAAGGCC TGGTGGACCA GGCGCTCGCG CTGCGCCGCG ACGCGCGCAA GCGCCGGCAG 
AAGCGCGGCC CGGGCCGCTT CAGCGCCTCG CGCGAGCAGG AGCGCGAGGC GCGCGCGCTG 
CTGGCGGAGG CGCGCCGGCT CGAGGCGCGG GCGGAGGCGG AGGTGCTGGA GCGGGCGCAG 
GTGGTGCTCG CCACGCTGAC CTCGCTCGAC GCGCCGGCGC TCGCCGGCCG CCGCTTCGCG 
CTCGCGGTGG TGGACGAGGC CACCCAGGCC GTGGAGCCGG CCGCGTACCT GGCGCTCCTG 
CGCGCCGACC GCGCGGTGCT GGCCGGCGAC CACCTGCAGC TGCCGCCCAC CGTGCTCTCC 
GCGGCGGCGC AGGCGGGCGG GCTGGGGGTG TCGCTGTTCG AGCGGCTGGT CGAGGCGCAC 
GGGGACCGGG CGCGGGTGAT GCTCGCCGAG CAGCACCGCA TGAACGCGCG GATCATGGCG 
TTCCCCTCCG AGGCGCTCTA CGGCGGCGCG CTCCGCGCCC ACCCGGCCGC GGCCGGCCGC 
GCCATCGACG ACGCGCCGCT CGAGCTGGTG GACACCTCCG GGCGCGGCTT CGAGGAGGAG 
ACGCCGGAGG GCTCCGACTC GAAGCAGAAC ACCGGCGAGG CGGAGCTGGC CGCCGCCGAG 
GTCCGGCGCC TGCTCGCGGC CGGGCTCGCC CCCGCCGACG TGGCGGTGAT CTCGCCGTAC 
GACGGGCAGG TGCAGCGCCT CCGGCAGCTC CTCGCCGACG AGGTGGAGGC GGGCCTGGAG 
GTGGACACCG TGGACGGCTT CCAGGGGCGC GAGAAGGAGG CGGTGGTGGT CTCGCTGGTG 
CGCTCCAACG AGGCGGGCGA GGTGGGCTTC CTCGCCGACG TGCGCCGGAT GAACGTCGCG 
CTCACCCGCG CGCGGGCGAA GCTGGTGGTC GTGGGCGACG GGAGCACCGT GTCGCGCCAC 
CCGTTCTACC GGAGCTTCCT CGAGCACGCC GAGCGCGCCG GCGCGTGGCG GAGCGCCTGG 
GAGCGGTGA 

 

Protein sequence

MDLTHHLDRL AALLAAEREE ERARFAEAKG RLSLAEREAR GLAIADVEAQ DEGALAGRAL 
VTFGRGGRPL PGGRIGAGSL VSVAQRRDTP PDAPQGVVAR RTRTAVAVAF DEPPPDWVTD 
GRVVLELEPS PVTWERLSGG LRRLRDDRAG KRWHAVLAPG SGAPPRFLRA PRGPVLEARL 
NPEQQAALDL ADRAEDLALV HGPPGTGKTT VLVEVIRRAA ARGESVLAAA PSNLAVDNLV 
ERLAAAGLAC VRVGHPARVL PGLLEHTLEA RVEAHEAARI AQGLVDQALA LRRDARKRRQ 
KRGPGRFSAS REQEREARAL LAEARRLEAR AEAEVLERAQ VVLATLTSLD APALAGRRFA 
LAVVDEATQA VEPAAYLALL RADRAVLAGD HLQLPPTVLS AAAQAGGLGV SLFERLVEAH 
GDRARVMLAE QHRMNARIMA FPSEALYGGA LRAHPAAAGR AIDDAPLELV DTSGRGFEEE 
TPEGSDSKQN TGEAELAAAE VRRLLAAGLA PADVAVISPY DGQVQRLRQL LADEVEAGLE 
VDTVDGFQGR EKEAVVVSLV RSNEAGEVGF LADVRRMNVA LTRARAKLVV VGDGSTVSRH 
PFYRSFLEHA ERAGAWRSAW ER