Gene A2cp1_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3969 
Symbol 
ID7297308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand- 
Start bp4422680 
End bp4423786 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content77% 
IMG OID643596776 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_002494356 
Protein GI220919052 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01900] succinyl-diaminopimelate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCGG CGACCGCCGA GCTGGCCGAG GCGCTGGCCC GCCGCACCGA GGCGCTGTGT 
GGCGTGCTCT CGCCCATCGG CCACGAGCGC GCGCTCTGCG ACCAGGTCGA GGCCTGGGCG 
CGGGCGCTCG GGCTCGGCGT GCGCCGGGTG AAGGACTCGC TCGTGGTCCA GGTGGACGCC 
GGCGCCGGGG CCGAGGCGGC GCGCGAGGGC CGGCCGCGGG TGGCGCTCTG CGGCCACCTC 
GACACCGTGC CGGTGCACGA GGACGATCGC GGGCCGCCGC GCCGCGAGGG CGGGCGGCTC 
ATCGCGCCGG GCAGCTCGGA CATGAAGGGC GGGCTCGCCC TCATGATGGA GGTGGCCGAG 
CGGCTGCCGC GCGCCGAGCG CTTCTGCGAG CTCCTGCTCG TGTTCTACGC GCGCGAGGAA 
GGGCCGTACC TCGAGAACGA GCTCGCCGAC GTGCTCCACG CGGCGGACGA GCTCGCCGGC 
ACCGAGCTCG CCCTCTGCCT GGAGCCGACC GACAACGTGC TCCAGCTCGG CTGCGTCGGC 
TCCATCCACG CGACGTTCAC GTTCGAGGGA CGCGCCGCCC ACTCGGCGCG GCCCTGGCAG 
GGCGAGAACG CGGTGCACCG GGCCGGCGCG CTGCTCGCCG AGCTGCACGC CCGCGCGCCG 
CGCGAGGCGG TCTCCGGGGG CCTCGTGTTC CGCGAGGTGA CGAGCGTCAC CCGCATCGAG 
GGCGGCCGCG CGCGCAACGT GGTGCCGGAC CGCTGCACGC TCAACGTGAA CCACCGCTTC 
GCGCCCGACC GCACGCTGCA GCAGGCCTCG GCCGAGCTGC GCGCGCTCGG CGAGCGGGTC 
GGCGCCGAGG TGGAGCTGAC CGATCTCTCC CCGGCCTGCC CCGCCTACGC CGATCACCCG 
CTGGTGCGCC GCCTGCTCGA GCGCACCGGC GTCGCCGCCG AGCCGAAGCA GGCCTGGACC 
GACGTGGCCC GGCTCGCCGC CCACGGCATC CCGGCCGTCA ACCTCGGCCC CGGCGCCACC 
GCGCAGGCGC ACCAGCGCGG CGAGTGGGTG GAGCTCGCCG CGCTCGAGCG CGGGTACCGG 
CTGCTGGAGC GCTTCCTGCG CGCCTGA
 
Protein sequence
MDPATAELAE ALARRTEALC GVLSPIGHER ALCDQVEAWA RALGLGVRRV KDSLVVQVDA 
GAGAEAAREG RPRVALCGHL DTVPVHEDDR GPPRREGGRL IAPGSSDMKG GLALMMEVAE 
RLPRAERFCE LLLVFYAREE GPYLENELAD VLHAADELAG TELALCLEPT DNVLQLGCVG 
SIHATFTFEG RAAHSARPWQ GENAVHRAGA LLAELHARAP REAVSGGLVF REVTSVTRIE 
GGRARNVVPD RCTLNVNHRF APDRTLQQAS AELRALGERV GAEVELTDLS PACPAYADHP 
LVRRLLERTG VAAEPKQAWT DVARLAAHGI PAVNLGPGAT AQAHQRGEWV ELAALERGYR 
LLERFLRA