Gene A2cp1_3930 details

Gene Information

• Locus tag: A2cp1_3930
• ID: 7297270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 4370946
• End bp: 4371614
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 643596739
• Product: ABC transporter related
• Protein accession: YP_002494319
• Protein GI: 220919015
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.194421
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCCGGC TCGCCGGCGT CACCAAGGCG TTCCGCGACG GCGACCGCCC GGTGCCGGTG 
CTGCGCGGCA TCGACCTGGA GGTGCGGCCG GGCGAGCTGG TCGCGATCGT GGGCCCCTCG 
GGCTCGGGCA AGTCCACCCT GCTCTACGTC GCCGGCGCGC TCGACCGTGA CTTCGCCGGG 
GAGGTCGAGG TGGCCGGCAC GCGGCTCGCC GGGCTCTCGC CCCGCGCGCG GGCCGAGCTG 
CGGAACCGCG CGGTGGGCTT CGTGTTCCAG TCGTTCAACC TGCTCGCGGG GATGTCGGCC 
CTCGAGAACG TGATGCTGCC GGGGATGCTC CGCCGCGAGG GCGCGGAGGG CACCGCCGCG 
GTGCGCGCCC GCGCCGCCGA GGCGCTCGCG TCGGTCGGGC TCGCGGAGAA GGCGCGCGCC 
ACGCCGGCGC ACCTCTCCGG CGGCGAGCGC CAGCGTGTGG CCATCGCGCG GGCGCTGCTG 
GCGCGCCCGC AGGTGCTCCT CGCCGACGAG CCGACCGGCA ACCTCGACGC GGTGAGCGGC 
GACGGCATCA TCCGGCTGTT CCAGCGCATG GCCGCCGGCG GGATGACCGT GCTGGTGGTG 
ACGCACGAGG AGCGCGTGTC CGAGGCGGCC TCGCGGGTGC TCCACCTCGA GGACGGGAGG 
CTCCGGTGA 

 

Protein sequence

MIRLAGVTKA FRDGDRPVPV LRGIDLEVRP GELVAIVGPS GSGKSTLLYV AGALDRDFAG 
EVEVAGTRLA GLSPRARAEL RNRAVGFVFQ SFNLLAGMSA LENVMLPGML RREGAEGTAA 
VRARAAEALA SVGLAEKARA TPAHLSGGER QRVAIARALL ARPQVLLADE PTGNLDAVSG 
DGIIRLFQRM AAGGMTVLVV THEERVSEAA SRVLHLEDGR LR