Gene A2cp1_3559 details

Gene Information

• Locus tag: A2cp1_3559
• ID: 7299609
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: -
• Start bp: 3976429
• End bp: 3977148
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 643596372
• Product: ABC transporter related
• Protein accession: YP_002493955
• Protein GI: 220918651
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAGC CGGTGGCCAC GGCGACGGTG GAGCTCTCCG GCGTCCGCAA GGACTACGTG 
GCCGGCTCGG TGGTCACGCC GGTGCTGCAC GGCGTGGACC TCGAGGTGGG CGCGGGGGAG 
TTCACCGCGC TCATGGGCCC GTCCGGCTCC GGGAAGTCCA CGCTGCTCAA CCTCATCGGG 
CTGCTCGACC GTCCCACCGG CGGCCGGGTG CGGGTGGCGG GCCTCGACAC CGCCGCGCTC 
GACGACGACG CCATGGCGCG CACGCGCGGG CGCACCATCG GGTTCGTGTT CCAGTTCCAC 
CACCTGCTGC CCGCGTTCAC CGCCCTCGAG AACGTCATGA TCCCGATGAT GGCGGCGCGC 
GGGCGGGCGG CCCCGGACAT GGCCGAGTGC GGGGAGCACC TGCTCCGGCA GGTGGGCCTC 
GGCGCGGTGC TGCACCGCCG CGCCACCCAG CTCTCCGGCG GCCAGCAGCA GCGGGTCGCG 
ATCGCCCGCG CCCTGGCGAT GGCGCCGCGG CTGGTGCTGG CCGACGAGCC CACCGGCAAC 
CTCGACACCC ACGCCGCGGA CGAGGTGTTC GCGCTGCTGC GCGAGTTCAA CCGCAGGGCC 
GGCATCACCT TCCTGATCGT GACGCACGAC CCGCGGCTCG CCGACCGCTG CGATCGCATC 
ATCGAGCTGG TGGACGGGCG CATCGTGGCC GACGGGCCCC ACCGGAGGAG CGGAGCATGA 

 

Protein sequence

MAEPVATATV ELSGVRKDYV AGSVVTPVLH GVDLEVGAGE FTALMGPSGS GKSTLLNLIG 
LLDRPTGGRV RVAGLDTAAL DDDAMARTRG RTIGFVFQFH HLLPAFTALE NVMIPMMAAR 
GRAAPDMAEC GEHLLRQVGL GAVLHRRATQ LSGGQQQRVA IARALAMAPR LVLADEPTGN 
LDTHAADEVF ALLREFNRRA GITFLIVTHD PRLADRCDRI IELVDGRIVA DGPHRRSGA