| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3514 |
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| Symbol | |
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| ID | 7299564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 3927704 |
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| End bp | 3928987 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643596327 |
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| Product | twitching motility protein |
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| Protein accession | YP_002493910 |
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| Protein GI | 220918606 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.190641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCA ACGAGATCCT GCAGGTCGCG CTCCGCGCCG GCGCCTCGGA CATCCACCTG
AAGGCGGGCC TCCCGCCGAT GTTCCGCGTC GACGGCTCGC TGGTGCCGCT GAAGGACGCC
CGCCGCCTGC CGCCCGAGGA GATCGCGCGG ATGGGCTTCG GGATCATGAA CGAGTACCAG
AAGGAGAAGT TCAAGCAGAC GAACGAGGTG GACCTCGCCT ACGGCGTGCC CGGCCTCGGC
CGCTTCCGCG TGAACGTCTT CCAGCAGCGC GGCACGCTCG GCGTGGTGCT CCGCGTCATC
CCGTTCCGCA TCCAGAGCAT CGAGCAGCTC ATGCTGCCCA AGATCCTGGA GAAGGTCGCG
GGCGAGCAGC GCGGCCTGGT GCTCGTCACC GGCACGACCG GCTCCGGCAA GTCCACCACG
CTCGCGGCGA TGATCGACCA CATCAACGCG ACCGAGACCT GCCACATCAT GACCATCGAG
GATCCCATCG AGTTCCTCAT CCGCGACAAG CGCTCGATCG TGAACCAGCG CGAGGTCGGG
GTGGACACGA TGAGCTTCGG GCAGGCGCTG AAGAGCGCGC TCCGGCAGGA CCCCGACGTC
ATCCTGGTGG GCGAGATGCG CGACCTCGAG ACCATCGAGA CCGCGCTCAC CGCGGCCGAG
ACCGGCCACC TGGTGATGTC CACCCTGCAC ACGCTCGACG CGACCGAGAC CATCAACCGC
ATCATCTCCG CGTTCCCGCC GTACCAGCAG AAGCAGGTCC GCCTGCAGCT CGGCTCGGTG
CTGAAGGCGG TGATCTCGCA GCGCCTGGTG CCGCGCGCCG ACGGGAAGGG GCGCGTGCCG
GCCATCGAGG TGCTGCTCGC GACGGGGCGC GTCCGCGAGC TCATCGAGGA CAAGGACCGG
ACGAAGGAGA TCACCGACGC CATCTCGCAG GGCCACACCA CCTACGGGAT GCAGACGTTC
GATCAGTCGC TCATGGCGCT GCTCCGCTCG AGCCTCATCA GCTACGAGGA GGCGCTCCGG
CAGGCCACCA ACCCGGACGA CTTCGCGCTG CGCGTCTCGG GCGTGAGCGG CACCTCCGAC
TCGAAGTGGG ACTCCTTCGA GAAGCCGGCC GAGGCGGGCC CCGCGGCCCG CGCGCCGGCG
CCCGGGCAGC CCGCCGCGCC CCGCCCCGCG CCCGGCGCGC CGCTCGGGCG GCTCGCGCCC
GGCGCCGCTC CCCGGCCCCC CGCCGCGCCC CGCGCCGGCG GCCAGGGCGG GCCGGACGAC
GACTTCCAGA TCGAGCGCTT CTAG
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| Protein sequence | MELNEILQVA LRAGASDIHL KAGLPPMFRV DGSLVPLKDA RRLPPEEIAR MGFGIMNEYQ
KEKFKQTNEV DLAYGVPGLG RFRVNVFQQR GTLGVVLRVI PFRIQSIEQL MLPKILEKVA
GEQRGLVLVT GTTGSGKSTT LAAMIDHINA TETCHIMTIE DPIEFLIRDK RSIVNQREVG
VDTMSFGQAL KSALRQDPDV ILVGEMRDLE TIETALTAAE TGHLVMSTLH TLDATETINR
IISAFPPYQQ KQVRLQLGSV LKAVISQRLV PRADGKGRVP AIEVLLATGR VRELIEDKDR
TKEITDAISQ GHTTYGMQTF DQSLMALLRS SLISYEEALR QATNPDDFAL RVSGVSGTSD
SKWDSFEKPA EAGPAARAPA PGQPAAPRPA PGAPLGRLAP GAAPRPPAAP RAGGQGGPDD
DFQIERF
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