Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3510 |
Symbol | |
ID | 7299560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 3924745 |
End bp | 3925449 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643596323 |
Product | TPR repeat-containing protein |
Protein accession | YP_002493906 |
Protein GI | 220918602 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.429554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGACA CCTTGAAGCA GGCCCTCGCG CTCGGACGCG GCTACTACCT CAAGAAGGAC TACGGGCTCG CCGAGCAGTA CCTGACCGAG GTCGTCGAGC AGAACCAGTC GTTCGCCGAC GTGTACAACA TGCTCGGCGT CATCTACCAC GACCAGGGGC AGTACCAGAA AGCGCTGCGC GCCTTCGAGG CGGCGCTCCG GATCAACCCC GGCTACACCG ACGCGGCGCT GAACCTCGCC GTCACGTACA ACGACACCGG CAAGTACCGC GAGGCGCAGG AGACGTACCG CCACGCGCTG TCGCGCTCGG GCGCGCAGCA CGGCAAGCTC GATCGCTTCG TGCAGGGCAA GCTCGCGAAC ATGTACGCCG ACATCGGCGA CGTGTACCTC TCCTCCGGCC TGTACGCCGA GGCGATCGCC GAGTACCGGC GGGCGCTCGC GCTGGGGCCG GCGTTCGTGG ACATCCGCGC GAAGCTGGCC GGCGCGCTGC GCGACGCCGG GGAGCGCGAG GCGGCCATCG CCGAGTACGA GGAGGCGGTC CGGCAGGCCC CGAGCTACGT GCTCGCGCGC CTCAACCTGG GCCTCTCGCT ATTCACGGTG GGTCGCAAGG ACGAGGCGGT GGGGCACTGG CAGCGGGTGC TGGAGATCTC TCCCGGCAAC CGCAACGCCG AGATGTACCT CCAGCTCGCG GCCGGGCAAT CGTAA
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Protein sequence | MEDTLKQALA LGRGYYLKKD YGLAEQYLTE VVEQNQSFAD VYNMLGVIYH DQGQYQKALR AFEAALRINP GYTDAALNLA VTYNDTGKYR EAQETYRHAL SRSGAQHGKL DRFVQGKLAN MYADIGDVYL SSGLYAEAIA EYRRALALGP AFVDIRAKLA GALRDAGERE AAIAEYEEAV RQAPSYVLAR LNLGLSLFTV GRKDEAVGHW QRVLEISPGN RNAEMYLQLA AGQS
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