| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3500 |
|---|
| Symbol | |
|---|
| ID | 7296761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3914337 |
|---|
| End bp | 3915626 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643596307 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_002493896 |
|---|
| Protein GI | 220918592 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC AGGTCGAAAC GGTCTCCCCC GTCGAGCGGA AGGTCACCAT CGAGGTGGAC
CCCGATCGCG TCGCCAAGGA GCTCGATCGC GCGTACGCCA GCCTGTCGCG GCGGGTGAAG
CTGCGCGGCT TCCGGCCCGG CAAGGCGCCG CGCAAGGTCC TGGAGCGCCA GTTCAAGACC
GAGGTGGAGG GGGAGGTCGC CGAGCGGATC GTCACCGAGA CGTTCACCGA GGCGGTCCGG
GTCGAGTCGC TGCCGGTGGT GGCGCCGCCC AGCGTCTCCA TCACCGACGG TGTGGCCGAG
GGGAAGCCCA TGCGCTACTC GGCGCGCGTC GAGGTGAAGC CGAAGCTCGA GCCCAAGGAC
TACAAGGGCC TCGAGGTGAC GCGGAAGCCG CCCGAGGTCA CCGACGAGGC GGTCTCCGGC
GAGCTGACGA AGATCCAGGA CTCGATGGCC CAGCTCGTGC CCGTCGAGGG GCGCTTCGAG
GCCCAGGAGG GCGACTGGGC GGTGATCGAT CACGAGGGCA CCATCGACGG GAAGCCGTTC
GATGGCAGCA CGGCCGAGGG AGTGACCGTC AAGGTGGCGC CGGGTCCGAT CACCGAAGGC
AACGTCGAGG CCCTCAAGGG CAAGAAGATC GGCGACGTGG TCGAGCTCGA CGAGCCGTTC
CCGGCCGACC ACCGCGACGA GGCGCTGCGC GGCAAGACGG CGCACATGAA GGTCACGCTG
AAGGCGCTGA AGGCCCGCCA GGCGCCGTCG CTCGACGACG CGCTCGCCAA GGACCTGGGC
ATCGAGGGCG TCGAGACCCT GGACGCGCTG CGCGCCCGGA TCCGGTCCGA CCTGGAGAAG
CGCGAGAAGC GGCGCGCCGA GTCGGAGCTG AAGGACGCGC TGGTGAAGGC GGCGCTGGCC
CGGAACGAGT TCGAGGTGCC GCCGGCGCTG GTGGAGCGCG CCATCGACAC CATGCTCGAG
GGCGCGGCCG AGCGGTTCGC CCGCCAGGGG ATCGACATCC GCCAGCTCCA GCTCGACGTG
TCGCGCATGC GCGCCGATCT GCGCGAGCAG GCGCTCCTCC AGGTGCGCGG CGCCCTGCTG
CTCGAGGCCA TCGCGGACGC CGAGAAGATC GAGGTCACCG AGGAGGACCT GGAGGCCGAG
GCGGCCCGCA TCGCGGACGA GCTGGGGATG CCCCTGGCGA AGGTCCAGCA GCAGACGCGC
GGCAAGGACG CGCGCGAGGC GCTAAAGAAC AGGATCAGGG AGGAGAAGGC GCTCTCGCTG
CTCTCCTCCG CTGCAACCAT CCAGCAGTAG
|
|---|
| Protein sequence | MKIQVETVSP VERKVTIEVD PDRVAKELDR AYASLSRRVK LRGFRPGKAP RKVLERQFKT
EVEGEVAERI VTETFTEAVR VESLPVVAPP SVSITDGVAE GKPMRYSARV EVKPKLEPKD
YKGLEVTRKP PEVTDEAVSG ELTKIQDSMA QLVPVEGRFE AQEGDWAVID HEGTIDGKPF
DGSTAEGVTV KVAPGPITEG NVEALKGKKI GDVVELDEPF PADHRDEALR GKTAHMKVTL
KALKARQAPS LDDALAKDLG IEGVETLDAL RARIRSDLEK REKRRAESEL KDALVKAALA
RNEFEVPPAL VERAIDTMLE GAAERFARQG IDIRQLQLDV SRMRADLREQ ALLQVRGALL
LEAIADAEKI EVTEEDLEAE AARIADELGM PLAKVQQQTR GKDAREALKN RIREEKALSL
LSSAATIQQ
|
|---|
| |