| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3304 |
|---|
| Symbol | |
|---|
| ID | 7300196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3679314 |
|---|
| End bp | 3680636 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643596113 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_002493704 |
|---|
| Protein GI | 220918400 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.85963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACACGC CGATCCTCCT CGCGCTCCTC CTCGCCACGC CGGGCGGTAC CCCGGCGGCG
CCCGCCGCCT CGCCGGCCGC GCCGCCCGAC GCCGCCGTCG CCGAGCTGAC GCTCGAGGCC
GCCCTCCGCG AGCTCGACGC GCAGAGCCTG ACCCTGGCGC AGGCGCGCAG CCGCGCCGAC
GAGGCGGGCG CGCTCGTGCG TCAGTCCGCC GCCGCGCTCC TCCCCACGCT CACCGCCCAG
GGCACCTATC TGAGGAACAG CGAGGGCGTC ACGCTGGCGC TCCCGGGCGG CCCCGAGCGC
GTCATCCAGC CGGACGAGTC GCTGAGCGTG ACCGCCACCG CGCGCGTCCC GCTGCTCGTC
CCCACCGCCT GGTTCGACCT CGCCGCCGCG CGCGACGCGG CCCGCGCCGA GGATCTCGGC
GCCGAGGCCA CCCGGCGCAC GCTCCGCACC GGCCTGGCGC AGTCGGCGCA CGGTGCCGCC
TCGGCGGAGG AGGTGGTGGC CGCCTCCGAG CGCGCCGTCG AGAGCGCGGC CGAGCTGGTG
CGGAGCGCGG AGCGCCGCGT GGCCGCCGGG ACCGCGGCGC CGCTCGACGT GCTGAAGTCG
CGCACGGAGC AGGTCCGGCG CGAGAGCGAC CTGGTGTCCG CGCGCGCCGG CCTGGAGCGG
GCGCGGCTGG CGCTCGGGAT CCTGCTCGGG CGGAGGGATC CGGTCCGGGT GGTGGTGCCG
GACGGCACCA CGGCGCCCGC GCCGGAGCTC GACGTTCCGG CCGAGGCGCT GGCGGGCGAG
GCGCTCGAGC ACCGGCCGGA GATCGCCGCG CAGGACGCGC GGGTGGCGGC GGCCGAGTCC
GGCGTCCGCT CCGCCTGGGC GCGCCTCGCC CCGCAGCTCT CCGCCTCCGG GTCCGCGTTC
GCGGCGGACA CCCCCTACGT CTCCGGCGAG AAGGACGGCT GGCGGGTGAC GCTCGACCTC
ACCTGGCAGC TCTACGACGG CGGCTTCCGG TACGGGAAGC GCCGCCAGGC GGAGGCCCAG
GCCGCCGGCG CGCGCGCCGG CGCGGAGGCG CAGCGGCTGG CGGTGCGCCA GGAGGTGGAG
GACGGCCGGC GCGACCTGCG CGTGGCGCGC GAGCGGCTCC GCCTGGCCGA CACGCAGTCG
CGGCTGGCCG GCGAGACGGC CGCGTCGGCG CGCCGGTCCT TCGAGGCGGG GATCGCGTCG
AGCCTCGACG TGATCGACGC GAACGACCGC CAGTACCTGG CCGAGATCGG CCTCGCCGAC
GCGCGCGCGC GGCTCGCGCA GGCGCGGCTC GCGCTCGGGC GCGCGCTGGG GCGGGACCTG
TAG
|
|---|
| Protein sequence | MNTPILLALL LATPGGTPAA PAASPAAPPD AAVAELTLEA ALRELDAQSL TLAQARSRAD
EAGALVRQSA AALLPTLTAQ GTYLRNSEGV TLALPGGPER VIQPDESLSV TATARVPLLV
PTAWFDLAAA RDAARAEDLG AEATRRTLRT GLAQSAHGAA SAEEVVAASE RAVESAAELV
RSAERRVAAG TAAPLDVLKS RTEQVRRESD LVSARAGLER ARLALGILLG RRDPVRVVVP
DGTTAPAPEL DVPAEALAGE ALEHRPEIAA QDARVAAAES GVRSAWARLA PQLSASGSAF
AADTPYVSGE KDGWRVTLDL TWQLYDGGFR YGKRRQAEAQ AAGARAGAEA QRLAVRQEVE
DGRRDLRVAR ERLRLADTQS RLAGETAASA RRSFEAGIAS SLDVIDANDR QYLAEIGLAD
ARARLAQARL ALGRALGRDL
|
|---|
| |