| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2982 |
|---|
| Symbol | |
|---|
| ID | 7298198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3304319 |
|---|
| End bp | 3304885 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643595794 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002493385 |
|---|
| Protein GI | 220918081 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0253387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCTCG ACGCGCGGGT GGCGGCGCTG CTGTCGACGG GAGACGCGGC GACGGCCGCG
ACCGAGGTGC TGCGCGCGCT CGGCCCCGGT GTCCGGCGCT ACCTGGCCTC CGTGCTCCGC
GACGACGACG ACGCCGCCGA CGCGTACGCG CGCTTCGAGG AGTCTCTGTG GCGCGCGCTG
CCGGCCTTTC GCGGCGAGGC CGCGCTGCGG ACCTGGGCGC TCCGGATCGC CTGGAGCGCC
GCCCGCCACG TGCGCGCCGA GGCGTGGCAC CGACACCGCA CGCGGCTGCG GACGCACGAC
GCCTCGGTCC TCCAGCAGAC GCAGGGCGCC TCCGCGGCGC GCCACGAGGA CCGCCGGCGG
AAGCTCGAGC TGCTCCGCCG CGCGCTCAGC GACGAGGAGC AGTCGATGCT CGCGCTGCGC
GTCGATCAGG AGCTCCCCTG GCCGGAGATC GCGCGCGTGC TCTCGCCCGA TGGGCGCCCG
CTCGACGTGG CAGTCCTGCA GAAGCGGTTC GAGCGCCTGC GCGCCCGCCT CGCACGCCTT
GCCCGACGGG AGGGGCTCCT CGACTGA
|
|---|
| Protein sequence | MELDARVAAL LSTGDAATAA TEVLRALGPG VRRYLASVLR DDDDAADAYA RFEESLWRAL
PAFRGEAALR TWALRIAWSA ARHVRAEAWH RHRTRLRTHD ASVLQQTQGA SAARHEDRRR
KLELLRRALS DEEQSMLALR VDQELPWPEI ARVLSPDGRP LDVAVLQKRF ERLRARLARL
ARREGLLD
|
|---|
| |