Gene A2cp1_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2899 
Symbol 
ID7299830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3208077 
End bp3209189 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content70% 
IMG OID643595710 
Producttwitching motility protein 
Protein accessionYP_002493302 
Protein GI220917998 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT 
TIGRFAM ID[TIGR01420] pilus retraction protein PilT 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.703969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAC AGGGTCCGCT CAGCGAGGAG CTGTTCCACT CGTTCCTGCA GCTCGCCGTG 
AAGCGCCAGG CGAGCGACGT GCACTTCGAG GTGGGCTACC CCCCCACCTA CCGGGTGTTC
GGGGAGCTGC TGGCCGCGAA GTACCCGCCG CTGACGCACG CGGACACGGA GGCGATCGCG
AACTTCGTCC TCCAGGCCCC GGGTTCGGGG TTCACGCCGC TCGACTTCCG CGAGGTGGAC
CGCAGCTACT CGCTGCCCGG GGTGTCGCGC TTCCGCGCGT CCATCTTCAA GCAGCGCGGG
AGCTGGGGCG CGGTGATGCG CACCATCCCG TTCCAGATCC CGGACTTCGA CACGCTGAAC
CTGCCGCCCG TCATCCGCAC CATCGCCGAG GCGCGCCGCG GGCTCATCTG CGTGACCGGC
GCCACGGGCA ACGGCAAGTC CACCACCATC GCCAGCATCA TCAACACGAT CATCCAGCAG
GAGCGGCTGC ACGTCGTCAC GGTCGAGGAT CCGATCGAGT TCATCTTCGC CGGCGGCAAG
GGCCTCGTGA TCCAGCGCGA GGTCGGATCG GACACGGCCA GCTACAGCGA CGCGCTGCGC
GCCGCGCTCC GGCAGGACCC CGACATCATC ATGGTGGGCG AGCTGCGCGA CCGCGAGGCC
GCCGACATCT GCCTGAAGGC GGCGGAGACC GGCCACCTCG TCATCACCTC GCTGCACACG
CCCGACGTGC CCCGCGCGGT CGGGCGCATC GTGGGCCTGT TCCCGGCCGA CGAGCAGGAC
AGCGTCCGGG CGCGGCTCGC CGACAACCTG CAGGCGGTCA TCGCGCTCCG GCTGCTCATG
CGCGCCGACG CCACCGGGCT CATCCCCGGG GTCGAGTCGC TGCTCGCCAC CACCAGCGTG
CGCGAGCTGA TCCGCGACGG CTCCAAGGTC AACGAGCTGC GCACGTACAT GGACACCGCC
GGCGCCGACC TGGGCATGCA CAGCTTCGAT CAGTACCTGT ACCGGCTGCA CGAGGCGAAG
CGCATCGGGC TCGACACCGC GCTCGCGAAC GCGACGCACC GGGCCGACCT GGAGCGGCGG
ATCATGATGG AGACCGGAGG CCGCCCCGCG TGA
 
Protein sequence
MEGQGPLSEE LFHSFLQLAV KRQASDVHFE VGYPPTYRVF GELLAAKYPP LTHADTEAIA 
NFVLQAPGSG FTPLDFREVD RSYSLPGVSR FRASIFKQRG SWGAVMRTIP FQIPDFDTLN
LPPVIRTIAE ARRGLICVTG ATGNGKSTTI ASIINTIIQQ ERLHVVTVED PIEFIFAGGK
GLVIQREVGS DTASYSDALR AALRQDPDII MVGELRDREA ADICLKAAET GHLVITSLHT
PDVPRAVGRI VGLFPADEQD SVRARLADNL QAVIALRLLM RADATGLIPG VESLLATTSV
RELIRDGSKV NELRTYMDTA GADLGMHSFD QYLYRLHEAK RIGLDTALAN ATHRADLERR
IMMETGGRPA