Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_2899 |
Symbol | |
ID | 7299830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 3208077 |
End bp | 3209189 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643595710 |
Product | twitching motility protein |
Protein accession | YP_002493302 |
Protein GI | 220917998 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.703969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGAC AGGGTCCGCT CAGCGAGGAG CTGTTCCACT CGTTCCTGCA GCTCGCCGTG AAGCGCCAGG CGAGCGACGT GCACTTCGAG GTGGGCTACC CCCCCACCTA CCGGGTGTTC GGGGAGCTGC TGGCCGCGAA GTACCCGCCG CTGACGCACG CGGACACGGA GGCGATCGCG AACTTCGTCC TCCAGGCCCC GGGTTCGGGG TTCACGCCGC TCGACTTCCG CGAGGTGGAC CGCAGCTACT CGCTGCCCGG GGTGTCGCGC TTCCGCGCGT CCATCTTCAA GCAGCGCGGG AGCTGGGGCG CGGTGATGCG CACCATCCCG TTCCAGATCC CGGACTTCGA CACGCTGAAC CTGCCGCCCG TCATCCGCAC CATCGCCGAG GCGCGCCGCG GGCTCATCTG CGTGACCGGC GCCACGGGCA ACGGCAAGTC CACCACCATC GCCAGCATCA TCAACACGAT CATCCAGCAG GAGCGGCTGC ACGTCGTCAC GGTCGAGGAT CCGATCGAGT TCATCTTCGC CGGCGGCAAG GGCCTCGTGA TCCAGCGCGA GGTCGGATCG GACACGGCCA GCTACAGCGA CGCGCTGCGC GCCGCGCTCC GGCAGGACCC CGACATCATC ATGGTGGGCG AGCTGCGCGA CCGCGAGGCC GCCGACATCT GCCTGAAGGC GGCGGAGACC GGCCACCTCG TCATCACCTC GCTGCACACG CCCGACGTGC CCCGCGCGGT CGGGCGCATC GTGGGCCTGT TCCCGGCCGA CGAGCAGGAC AGCGTCCGGG CGCGGCTCGC CGACAACCTG CAGGCGGTCA TCGCGCTCCG GCTGCTCATG CGCGCCGACG CCACCGGGCT CATCCCCGGG GTCGAGTCGC TGCTCGCCAC CACCAGCGTG CGCGAGCTGA TCCGCGACGG CTCCAAGGTC AACGAGCTGC GCACGTACAT GGACACCGCC GGCGCCGACC TGGGCATGCA CAGCTTCGAT CAGTACCTGT ACCGGCTGCA CGAGGCGAAG CGCATCGGGC TCGACACCGC GCTCGCGAAC GCGACGCACC GGGCCGACCT GGAGCGGCGG ATCATGATGG AGACCGGAGG CCGCCCCGCG TGA
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Protein sequence | MEGQGPLSEE LFHSFLQLAV KRQASDVHFE VGYPPTYRVF GELLAAKYPP LTHADTEAIA NFVLQAPGSG FTPLDFREVD RSYSLPGVSR FRASIFKQRG SWGAVMRTIP FQIPDFDTLN LPPVIRTIAE ARRGLICVTG ATGNGKSTTI ASIINTIIQQ ERLHVVTVED PIEFIFAGGK GLVIQREVGS DTASYSDALR AALRQDPDII MVGELRDREA ADICLKAAET GHLVITSLHT PDVPRAVGRI VGLFPADEQD SVRARLADNL QAVIALRLLM RADATGLIPG VESLLATTSV RELIRDGSKV NELRTYMDTA GADLGMHSFD QYLYRLHEAK RIGLDTALAN ATHRADLERR IMMETGGRPA
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