| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2153 |
|---|
| Symbol | |
|---|
| ID | 7297162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 2392717 |
|---|
| End bp | 2393550 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643594950 |
|---|
| Product | Prephenate dehydratase |
|---|
| Protein accession | YP_002492559 |
|---|
| Protein GI | 220917255 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCG GATACCTCGG CCCCCCGGGC ACCTTCAGCG AGGAGGCGGT CGCGCGCTGC
GAGGCGGTCC GCGGCGCGGA GGCGGTGCCG TTCCCCACCT TCGCGGACGC GCACGAGGCG
CTGCTGCGCG GGGAGCTCGA CGCCGCGCTG CTGCCCATCG AGAACTCGAT CGAGGGCGCG
GTGAGCGCGG TGCTCGACCT GCTGGTGCAC CGGCCCGGCG CCCGCATCCG GGCCGAGCTG
CTGCTGCAGG TCCGCCAGCA CCTGCTGGCC CGGCCCGGCA CGCGGCTGGA GCAGGTGCGG
CGCGTGCTCT CGCACCCGCA GCCGCTCGGG CAGTGCGCCC GCTTCCTGAG GGCGCGGCTG
CCCGCGGCGG CGCTCGAGCC GGCGCTCTCG ACCGCGGAGG CCGCGCGCAA GGTGGCCGCC
GGCGAGCCGG ACGCGGCGGC GCTCGGCCCG CGCCGCGCCG CCGAGCGCTA CGGCCTGGAG
GTGCTGGCGG AGAACGTCCA GGACTCCGAC GAGAACGTGA CGCGGTTCGT GCTGCTGGCG
CGCGAGGACG CCCCGCCGAG CGGCGCCGAC CGGACCAGCA TCGCCTTCAC GCTCGATCGC
GACCGGCCGG GCGGGCTGTA CGAGGTGATG GGCGAGTTCG CCCGCCGCGG GATCAACCTG
TCCAAGATCG AGAGCCGGCC CACCAAGCAG GCCATGGGCC ACTACGTGTT CTACCTGGAC
TTCGAGGGGC ACCGCGCGGA CCCCGCCGGC GCGAGCGCGC TCGAGGGCGT GCGCGAGCAG
GTGCACGAGC TGCACCTCCT GGGCTCGTAC CCGCGCACCG GCGCGCCGGT CTAG
|
|---|
| Protein sequence | MRVGYLGPPG TFSEEAVARC EAVRGAEAVP FPTFADAHEA LLRGELDAAL LPIENSIEGA
VSAVLDLLVH RPGARIRAEL LLQVRQHLLA RPGTRLEQVR RVLSHPQPLG QCARFLRARL
PAAALEPALS TAEAARKVAA GEPDAAALGP RRAAERYGLE VLAENVQDSD ENVTRFVLLA
REDAPPSGAD RTSIAFTLDR DRPGGLYEVM GEFARRGINL SKIESRPTKQ AMGHYVFYLD
FEGHRADPAG ASALEGVREQ VHELHLLGSY PRTGAPV
|
|---|
| |