Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1216 |
Symbol | |
ID | 7299082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 1364951 |
End bp | 1366003 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643594003 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_002491626 |
Protein GI | 220916322 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCCC CCATGACCCA CAGATTCCTC GCCGCGTGCC GCCGTGAGCC CGTCGACCGC GTTCCCGTCT GGATGATGCG CCAGGCCGGC CGCTACCAGC CGTCCTACCG CGCCGTCCGC CAGAAGGTGA GCTTCCTGGA GCTGTGCCGC TCGCCGGAGC TCATCGCCCA GGTGACGGTC GCGCCCATCG ACGAGTTCGG CTTCGACGCC GCCATCCTGT TCTCGGACAT CCTGGTCCAC CTGCCGGCCA TGGGCCTCGA CCTCTCCTTC GAGAAGGGCG AGAAGGGCAA GGGCGACGGC GGGCCGAAGA TCGGCAACCC GGTGCGCACC CGCGCCGACG TGGACGCGCT GCGCGTGCCG GTCCCGAAGA AGGACCTGCC GTACGTGCTC GACGGCGTGC GCGCCATCCG CGCCGCCCTC GCCGACCGCG TGCCGCTCAT CGGCTTCGTG GGCGGTCCGT TCACGGTGGC GAGCTACGCC GTCGAGGGCG GGAGCCAGGG CTTCACCCGG CTGAAGACCA TGCTGTACGC CGAGCCGGCG ACGGCGCACG CGCTGTTCGA GAAGCTCACC CAGGCCGCGA TCGTGCAGAT CGAGGAGCAG GTGGCGGCCG GCGCGCACGC GGCCCAGATC TTCGAGAGCT GGCTGGGCGA GCTGGCCCGC GAGGATCTCG AGGAGTTCAG CTTCCCGTAC CTCGCCCGCA TCGCCGAGGC GGTGCGCAAG ACCGGCGTCC CGTCGATCCT GTTCTCCACC GGCACCACCG CGCACCTCGA GCCGATGGCG AAGCTCGGCT ACGACGTCGT CTCGGTGGAT TGGCGCATCC CCATCGACGA GGCGCGCGCC CGGCTGCCGG GCGTGGCGGT GCAGGGCAAC TACGACTCGA CGCTGCTCCT CGGGCCTCGC GACGTCGCGG TGGCGCGGGC CCAGCAGCTG CTCCGGGCGG CCGGGCCGAC CCCGGGTTAC ATCTTCAACC TCGGCCACGG GATCCAGGTG GGCACCCCGA CCGAGAACGT GAAGGCGGTG GTGGACGCGG TCCACGCCTT CGGCTGGAAG TGA
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Protein sequence | MAAPMTHRFL AACRREPVDR VPVWMMRQAG RYQPSYRAVR QKVSFLELCR SPELIAQVTV APIDEFGFDA AILFSDILVH LPAMGLDLSF EKGEKGKGDG GPKIGNPVRT RADVDALRVP VPKKDLPYVL DGVRAIRAAL ADRVPLIGFV GGPFTVASYA VEGGSQGFTR LKTMLYAEPA TAHALFEKLT QAAIVQIEEQ VAAGAHAAQI FESWLGELAR EDLEEFSFPY LARIAEAVRK TGVPSILFST GTTAHLEPMA KLGYDVVSVD WRIPIDEARA RLPGVAVQGN YDSTLLLGPR DVAVARAQQL LRAAGPTPGY IFNLGHGIQV GTPTENVKAV VDAVHAFGWK
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