Gene A2cp1_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1078 
Symbol 
ID7300011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp1207310 
End bp1208086 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content80% 
IMG OID643593870 
ProductLmbE family protein 
Protein accessionYP_002491494 
Protein GI220916190 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0142184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCCGC TGCTCCTGGT GATCGCCGCC CATCCGGACG ACGAGACGAT CGGCGCGGCG 
AGCCTGCTCC TCCGCCACCG GGCGGCCGTC GTCCACGTGA CGGACGGTGC GCCGCGGGAT
CCCGCGCTGC GGGCGGGCGG CGCCGCGAAC GGCCGCGAGG CCTACGCCCG GCTCCGCCGC
GACGAGGCGC TCGCCGCGCT CGCCGAGGCG AGCCTCCGCG CCGCGGACGT CATCGGGCTG
GGCGTGGTGG ACCAGGAGGC GAGCGAGGCC ATCGCCGCCG TGGCGAGGGA GCTGGCGGCG
CTGGTCCGGT CGCTCCGGCC CCGCCTCGTG GTGACGCACG CGTTCGAGGG CGGCCACCCG
GATCACGACG CGACCGCGCT GGCGGTGCGC TCGGCGCGGG CGCTGCTGGC GCGGACGCCG
GGCGGCGCCC CGGCGCTCGC GGAGATGACG AGCTACCACC GGGGCCCGGA CGGCGCGGTC
GTCACCGGCA CGTTCCTGCC CTCGCGCGCC GCCGAGCGCG TCCGCTGGCT CGAGCCCGAC
GCCCGGGAGG CGAAGCGCCG GATGCTCGCG GCGTACGCGA GCCAGCGCGA GACGCTGGCG
GCGTTCGGGG CGGACGTCGA GCGGTTCCGG TCGGCGCCGC CGCTCGACCC CGGCCGGCGC
CCGCACCCGG GCGCGCTGCA CTACGAGGCG ATGGGCTGGG GAACCTTCGG CGCGCTCGCG
GCGCACGCGC GCCGGGCGGC CGCCGCGCTC GGCCTCGGGG AGGCCGCGTG GCGCTGA
 
Protein sequence
MPPLLLVIAA HPDDETIGAA SLLLRHRAAV VHVTDGAPRD PALRAGGAAN GREAYARLRR 
DEALAALAEA SLRAADVIGL GVVDQEASEA IAAVARELAA LVRSLRPRLV VTHAFEGGHP
DHDATALAVR SARALLARTP GGAPALAEMT SYHRGPDGAV VTGTFLPSRA AERVRWLEPD
AREAKRRMLA AYASQRETLA AFGADVERFR SAPPLDPGRR PHPGALHYEA MGWGTFGALA
AHARRAAAAL GLGEAAWR