| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1058 |
|---|
| Symbol | |
|---|
| ID | 7299991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1186857 |
|---|
| End bp | 1188050 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643593851 |
|---|
| Product | protein of unknown function DUF1006 |
|---|
| Protein accession | YP_002491475 |
|---|
| Protein GI | 220916171 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.338087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC TCACGCCCAC CGAGGCCCGG GCCTTCCTCG TCGGCCACCA CCTGCTCCGC
GCGCCGGAGC TCCCGCCCGG CGCGGCCGGC CTCCGCGCGC TGCTCGAGCG CCTCCGCTGC
ATCCAGCTCG ACCCGCTCGA TCCACTCGGG ACGAACGCGG ACCTGGTGGC GCTGGCGCGC
GTGGACGGCA TCGCGAAGGG CGACGTGTAC CGGCACCTCC TGCCCGGCCA CGCGTTCGAG
CACTTCGCGA AGGAGCGGTG CCTCCTGCCC GCCGGCGCCT TCCCGTGGTA CCGCGACGAG
CTCGCCATCG AGGCGCCGTG GTGGTCGCAC GCCGAGCGGC TGCGGCGCCT CCCGCCCGGC
GTGGTGGAGA AGGTCCTCGA GGAGGTCCGG GCCCGCGGCC CCGTCGCGGC CGACGACCTC
ACCGACCACG GCCCGGTGGA GCGGCTCGAC TGGAGCGGCT GGAAGGGCAC GCCGCGCGCC
GCGAAGATGG CGCTCGAGGT CCTGCAGACG CGCTGCGAGG TGGTGGTGTG CGGCCGCTCC
GCGCGCGGCA AGGTCTACGA CGTGCCGGAG CGTGCCCTGC CCGGCGCGGC CGGGACGCGC
GTCCACGCGC GCGGCCGTTC GCGGGCGCGG CGCGCCGAGG CGTTCCACCG CTGGGCGGTG
GTCGAGCGGG TGGAGGCCGC CGGCCTGCTC TCGACCGCGG GCGGCTCGAC CTGGTCGATG
CTGGAGCCGG CGCGCCGCGC GCGGATCCCG GAGGCGCTCG TGGCCGAGGG CGCGGTGGAG
GCGGTGCAGG TCGCCGGCTC GCGGCGGACG TTCCTCGCGC CGCGCGGCTT CGCGAGCCGC
CGTCACCCGC CGCCCGACGG CCGCGTCCGC CTGCTCGGCC CGCTCGACCC GCTGCTCTGG
GATCGCGGCC TCGTCCGCGC CGCGTTCGGC TTCGACTACA CCTGGGAGGT CTACCGCCCC
GCGCACCTGC GGCGCTTCGG CTGGTACGTG TGCCCGCTGC TCCAGGGCGA CGCGCTGGTG
GGCCGGCTCG ACGGCGCGCT GAGGGACGGC GTGCTCCGCG TCCGCGCGGT GTGGGTGGAA
CCCGGCGCGG CCCTCGACCG CGCCGACCTC CTCGCGTGCC TGGAGCGCCA CGCGGCGGCG
TGCGGCGCCC GGCGCGTGGT CCTGCCGCGA CGGTTCCGGA TCAACCGAGC GTGA
|
|---|
| Protein sequence | MTILTPTEAR AFLVGHHLLR APELPPGAAG LRALLERLRC IQLDPLDPLG TNADLVALAR
VDGIAKGDVY RHLLPGHAFE HFAKERCLLP AGAFPWYRDE LAIEAPWWSH AERLRRLPPG
VVEKVLEEVR ARGPVAADDL TDHGPVERLD WSGWKGTPRA AKMALEVLQT RCEVVVCGRS
ARGKVYDVPE RALPGAAGTR VHARGRSRAR RAEAFHRWAV VERVEAAGLL STAGGSTWSM
LEPARRARIP EALVAEGAVE AVQVAGSRRT FLAPRGFASR RHPPPDGRVR LLGPLDPLLW
DRGLVRAAFG FDYTWEVYRP AHLRRFGWYV CPLLQGDALV GRLDGALRDG VLRVRAVWVE
PGAALDRADL LACLERHAAA CGARRVVLPR RFRINRA
|
|---|
| |