| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0912 |
|---|
| Symbol | |
|---|
| ID | 7298582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 1031647 |
|---|
| End bp | 1033044 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643593705 |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_002491330 |
|---|
| Protein GI | 220916026 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.145369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGA CGCCGGTCGA CCTGGCCCTG GCCCACTACG AGAAGAACGC CGCGAACTAC
CTGGACGAGC TGAAGCGGCT GGTCCGCATC CCCAGCGTCT CGTTCCCGGG CTTCCCGGAG
AACGAGGTGC GGCGCAGCGC CGAGGCGACC GCCGAGCTCC TGCGGCGGCG CGGCTTCGAG
AAGGTCGAGG TCCTCGAGGT CGAGGGCGCG CACCCGTACG TCTTCGGGGA GCGCGTCGAG
GATCCCGCCG CGCCCACCCT GCTGCTGTAC GCGCACCACG ACGTGCAGCC CGCCGGCGAG
GCGGAGGCCT GGAAGACCCC GCCGTTCGAG CCCACCGAGC GCGACGGCCG CCTGTGGGGC
CGCGGCGCCG CCGACGACAA GGCCGGCATC ATCGTGCACG CGGCGGCGGT GGACTCCTGG
GTGCGCGGCG CCCGGCGCAT GCCGCTCAAC GTGAAGATCG TGGTCGAGGG CGAGGAGGAG
ATCGGCTCCG ATCACCTGAC GGCGTTCCTC ACCCGCTACC GCTCGCGCCT CGACGCCGAC
GCGATGGTGC TCACCGACAC CGGCAACGTG GATTCGGGCG TGCCGTCGAT CACGGTGGCG
CTCCGCGGCC TGGTGGTCCT CGAGGTGGAG GTGCGCGCGC TCGAGCAGAG CGTCCACTCC
GGCATGTGGG GCGGCCCGGT GCCGGATCCC ACCATGGCGC TCGCCAAGAT GCTCGCCGCG
CTGGTGGACG ACGACGGGGC CATCGCCATC CCCGGGATCC ACGACCGCGT CCGCCCGCTC
ACCCGCGAGC AGCGCGAGGC CATCGCCGCG CTGCCGGTCA CCGAGGAGGA CATCCGGCGG
CAGGCCCGGC TGCGGCCCGG CGTGCGGCTG CTGGGCGGGC GCCATCCGCT GGAGACGAAC
TGGTGGCAGC CGTCGCTCGC GGTGAACGCC ATCCAGGCGT CCTCGCGCAA GGACGCGCGC
AACATCATCA ACGACGTGGC CTGGGCGCGC CTCGGCGTGC GGCTGGTCCC GGACATGGAC
CCGGTGGACG TGCGCGAGAA GCTCGTCGCG GCGCTGCACG CCGCAGCGCC CTGGGGCGTG
GAGGTGACCG TGAAGCCGGA CACCGCCGGC GCGCCCTGGA TCACCGACCT CGGGCACCCG
GCGTTCGACG CCGCGTTCCG GGCCCTGGAG AAGGGGTTCG GGCGCCCCGC CCTCGCGATC
GGGTGCGGCG GGTCGATCGG GTTCGTGGAG CCGTTCGCCA AGGCGCTCGG CGGCGTCCCG
GCCCTGCTCA TCGGCGTCGA GGATCCGTCG TCGAACGCGC ACTCGGAGAA CGAGAGCCTG
CTGCTCTCCG ACTTCCAGAA GGCCATCCGG AGCGCGATCC ACCTCTACGA GGAGCTGGCC
GGCGCGCTGC GCCGGTAG
|
|---|
| Protein sequence | MPETPVDLAL AHYEKNAANY LDELKRLVRI PSVSFPGFPE NEVRRSAEAT AELLRRRGFE
KVEVLEVEGA HPYVFGERVE DPAAPTLLLY AHHDVQPAGE AEAWKTPPFE PTERDGRLWG
RGAADDKAGI IVHAAAVDSW VRGARRMPLN VKIVVEGEEE IGSDHLTAFL TRYRSRLDAD
AMVLTDTGNV DSGVPSITVA LRGLVVLEVE VRALEQSVHS GMWGGPVPDP TMALAKMLAA
LVDDDGAIAI PGIHDRVRPL TREQREAIAA LPVTEEDIRR QARLRPGVRL LGGRHPLETN
WWQPSLAVNA IQASSRKDAR NIINDVAWAR LGVRLVPDMD PVDVREKLVA ALHAAAPWGV
EVTVKPDTAG APWITDLGHP AFDAAFRALE KGFGRPALAI GCGGSIGFVE PFAKALGGVP
ALLIGVEDPS SNAHSENESL LLSDFQKAIR SAIHLYEELA GALRR
|
|---|
| |