| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0666 |
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| Symbol | |
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| ID | 7300389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 745376 |
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| End bp | 747103 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643593463 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_002491089 |
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| Protein GI | 220915785 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGCACG CCGGCGACGC GCCGGACGCC CGCGTCGGCG GGACCATCCG ACCCTCCGCC
CACCTCGCCG CCGTCGTCGC GGTGATCCTG CTGGGCCTCG CCGCCTACGC GAACGCCTGG
CACAGTGCGT TCGTGTTCGA TGATGTCGAT CACGTCCGCG ACAACCCGAT CGTTCGGAAC
CCCTCGGCCT TCGGCTGGAA CGGCGGTGGA TGGCGTGCGC TCCCGAGCCG CAGCATCGCC
TACCTGTCGT TCGCGCTGAA CTACCGGTTC GGCGGGAGTG ACCCGGTCGG CTTTCACGCG
GTGAACGTCG CAATGCACCT GCTCACGGCG ACGCTGGTGT ACGCGCTGGT GATCGCCGCG
TTCCGTACGC CGCGCCTCGC GCGATCGGCC CTGGCGGCCC AGGCGAGCAC GGTCGGCCTC
GTCGCCGCGG CGCTCTTCGT CGCGCACCCG CTGCAGACCC AGGCGGTTAC CTACGTCGTC
CAGCGGATGA CCTCGCTGGC TGCGCTATTC TACCTAGGCG CCGTGGCTCT CTACGCGCGC
TGGCGGCTGA TGGACGCGAC GCGGCACCGC TGGGGCCGCC CGGCCGCATA CGCCGGGATG
CTCGCGTGCG CGGTGCTCGC GATGAGGACG AAGGAGATCG CGTTCACGCT GCCCTTCGCG
ATCGCCCTGT ACGAGCTCAC GTTCTTCGAG CCGGACGGCC GGCGGCTCCG GCGCCTCTGG
CCCATCCTCA CCACCGCGGC GATCATTCCA CTCACGGTCC TCCTCACCGC GACAGCGGGC
GGTGGCGCGG ACGTGGCGAG CACCACGCTC GCCGCCACGC GCGTGCAGAC CGATCTCAGC
CGCCTCGAGT ACCTGATCAC GCAGATACCC GTGGTGGTCA CCTACCTGTT CCTGCTGCTC
GTGCCGGTCG GGCAGAACAT CGACCACGAT TACCCGATCT ACCGGTCGTT CTTCGCCCCC
GAGGTACGCT CCGGGCTGGC GGTCCTCGCC GCGGCCGCGT GCGCCGGAGC GTGGGCGTAC
GCGCGGACCT CGGGGAAGGC GCGCAGCCCG GCGGATCCCG CGGCCCGGCT GGTGGGGTTC
TGCGTCGCGT GGTGGTTCCT GACGCTCGCC GTCGAGTCGA GCGTCATCCC CATCGTGGAC
GTGATCAACG AGCACCGCGT CTACCTGCCC TCCGTCGGCT TCTTCGTCGC TGCCGCGATC
GGGATCCTGC TCGCCGCGCG CCGGGCAGTC GGGGCAGACG TCGCGCCGCG TGCCGCCGCA
CTGGCGGGGA TCGGCCTGGC CTGCGTCTTC GCGGTCGCCA CCCTGGCCCG GAATCGCGTC
TGGTCGAGCG ACGTGGCGCT CTGGACTGAT GCAGCCGCGA AGTCCCCGAA CAAGATGCGG
CCCAACCTGA ACCTCGGGAC CGCGCTGGTC GAGGCGGGGC GGTTTCGCGA GGCCGAAGCG
CCGCTCCGTC GAGCCGCGCT GCTGGATCCC GCGTCGGCGC TCCCGCACGT GCAGCTCGCG
GGCGTGCTCC TGACGCAGCG GCGCGGTGCC GAGGCGGAGG CGGAGCTGCG CTCGGCGCTC
CGCCTCGCCC CTCGCGATCC GGACGCCACC TTCAACCTCG CGATGCTGCT GTCCGGGTCG
AACCGCTCGG ACGAGGCGAG GCCGCTGTTC AGCCGGTTCC TCGAGATCGC GCCCGCCTCG
TACGGGCGAG CGCGGCGGAT CGCCGCCGAT CGGCTCGCCT CGCATTGA
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| Protein sequence | MTHAGDAPDA RVGGTIRPSA HLAAVVAVIL LGLAAYANAW HSAFVFDDVD HVRDNPIVRN
PSAFGWNGGG WRALPSRSIA YLSFALNYRF GGSDPVGFHA VNVAMHLLTA TLVYALVIAA
FRTPRLARSA LAAQASTVGL VAAALFVAHP LQTQAVTYVV QRMTSLAALF YLGAVALYAR
WRLMDATRHR WGRPAAYAGM LACAVLAMRT KEIAFTLPFA IALYELTFFE PDGRRLRRLW
PILTTAAIIP LTVLLTATAG GGADVASTTL AATRVQTDLS RLEYLITQIP VVVTYLFLLL
VPVGQNIDHD YPIYRSFFAP EVRSGLAVLA AAACAGAWAY ARTSGKARSP ADPAARLVGF
CVAWWFLTLA VESSVIPIVD VINEHRVYLP SVGFFVAAAI GILLAARRAV GADVAPRAAA
LAGIGLACVF AVATLARNRV WSSDVALWTD AAAKSPNKMR PNLNLGTALV EAGRFREAEA
PLRRAALLDP ASALPHVQLA GVLLTQRRGA EAEAELRSAL RLAPRDPDAT FNLAMLLSGS
NRSDEARPLF SRFLEIAPAS YGRARRIAAD RLASH
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