| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0353 |
|---|
| Symbol | |
|---|
| ID | 7296457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 399067 |
|---|
| End bp | 400989 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643593148 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding protein |
|---|
| Protein accession | YP_002490778 |
|---|
| Protein GI | 220915474 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR02486] reductive dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.200551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CGGACCGTTA CGTCCTCTGG GGCATCGGCG CGGTGTGGGC CCTCGACCTC
GCCACCTTCA TCCTCACGGA CTTCCACATC TACGCGTTCC TGGCGCTCTT CGTGATCGCC
GCGCTCGGGT TCGCCTGGTG GGGACTCCGC TTCCAGGTGA CGGAGCCGAT GCGCCGCAAC
GCGGCGCTCG GGGTGACCGG CTTCTGGACG GTGGCGATGG CGCTGCTCTT CGCGCCCTGG
CCCATCCCCG ACAAGCCGGA GTACATCGTC GGCGAGGTCC ACCGGTTCAG CGAGATGGAG
CACGGCTTCT CGCGCGTGCT CACCGGCGTC ACCGGCCCGA ACATCGCGGC GGGCGGCCTG
GTGTACGGCG ACCCCGCCGA CCAGCAGAGC ATGATGACGG AGTGGGGCTG GCCGCCGAAC
TTCATCAGCG GCTACCCGCT CGCCCGGGCG CTGTTCGGCG GCACCATCCT CATGGAGCGG
CTCCGCGGCG CCACCACCAT CGGCGGCGAG CCGGCGAACC CGCTCCGCTA CAGCTGGAGC
AACTTCCAGG GCGAGAAGCG CGACAAGAAG CTCGGCTGGA ACAAGGGAGA CCTGCTCCTC
GGCGAGGTGG CCAAGGCGAT GGGCTCGGCG AAGGCGACCT ACACGCCGCA CGAGAACACG
CTCATGGTGA AGTCGATCGC GTCGTGGCTC GGCTCACCGC GCATCGCCAT CGCGGCCGTC
GATCCCCGCT GGTTCTACTC GCACGACCTC AGCACGTACG GCACGCCGCT GCCGCTGAAG
GACGCGAAGG ACCTGAAGTA CGTCATCCAG ATCTTCACCG ACCAGGACTG GACCCGCATC
CACAACGACG CCGGGACCTC CTGGTGGTCG GTGTCGAACA GCGGCCAGGC GTACTCGACG
AGCGCGTGGA TCGGCATCCG CATGGCGCAG ATGCTCCGTG ACATGGGCTA CGTGGCCCGC
GTCGGGTTCG GCGGGATGAA CTACGAGAAC ATCGAGACGC CGGCCTCGGT GTACAGCGGC
ATCGGCGAGT ACGGCCGGCT CTCCGACGCG GTGGTGCCGA CGGCGGGCGG CCTGCGCTTC
AAGTCCGCCA CCATCTTCAC CGACTTCCCG CTGGAGGCGG GCGATCCGAA GCAGGGCTGG
GGCATCACCC GCATGTGCGC GAACTGCGAT CGCTGCGCTC GCGCCTGTCC CGTGAACTCC
GTGCCGATGG GGGAGCCCAC CGTCGAGAAC GGCGTGAAGA TCTGGCAGGT CGACAAGGAC
AAGTGCACGC GCTTCCGCAC CGGCAACCTG AACGGCAACA TGTGCGGCGC CTGCCTGGCG
GTCTGCCCGT ACAACAAGCC GGACACCGCG TTCCACCGGG TGGGCAACTA CATCATCCGG
CACAGCCCGA TCGCGACGTA CCTGTTCGGC AACATCCACG GCGTCGGCCT CGAGGACTGG
CTCGACTTCG AGTACAGCTC CGAGGCCAGC CCGTACAACG TGAGCCGCCC GGCCCGCTGG
ATCCAGGAGG ATCCCGGCTG GAAGGCCACG TTCCCCTACC AGGTGGGCCA GTACATCTAC
ACCGAGCGTG ACCGCTCCAA GAACGAGGAG TGGGCGTCCG GCGTGGACCC GAAGATGGGG
AAGGTCGGGC TCAGCTACAA GGGCACGACC TGGGGAAAGA TCCCGGACCG CCTGCTGGAC
GCCAGCGGCC GCAACCGCAA CGTCCACTGG GACTACGAGG CCGGCGAGCT CCCGCCGAAC
CTGCCGCTCC CCGGCAAGCT GCTCACGCCG GAGGAGGCCA CCGCGCTGCT GAAGGAAGGC
AAGGCGTTCT CCGGCGCGTC CTACTCGCCG GACGACGAGG TCTTCCCTCC GCGCGATCCC
AAGTACGAGA AGCAGACGCT CACCTACGAG CAGGCGGCCC GCATGTGGGC GGAGGAGAAG
TGA
|
|---|
| Protein sequence | MTKTDRYVLW GIGAVWALDL ATFILTDFHI YAFLALFVIA ALGFAWWGLR FQVTEPMRRN
AALGVTGFWT VAMALLFAPW PIPDKPEYIV GEVHRFSEME HGFSRVLTGV TGPNIAAGGL
VYGDPADQQS MMTEWGWPPN FISGYPLARA LFGGTILMER LRGATTIGGE PANPLRYSWS
NFQGEKRDKK LGWNKGDLLL GEVAKAMGSA KATYTPHENT LMVKSIASWL GSPRIAIAAV
DPRWFYSHDL STYGTPLPLK DAKDLKYVIQ IFTDQDWTRI HNDAGTSWWS VSNSGQAYST
SAWIGIRMAQ MLRDMGYVAR VGFGGMNYEN IETPASVYSG IGEYGRLSDA VVPTAGGLRF
KSATIFTDFP LEAGDPKQGW GITRMCANCD RCARACPVNS VPMGEPTVEN GVKIWQVDKD
KCTRFRTGNL NGNMCGACLA VCPYNKPDTA FHRVGNYIIR HSPIATYLFG NIHGVGLEDW
LDFEYSSEAS PYNVSRPARW IQEDPGWKAT FPYQVGQYIY TERDRSKNEE WASGVDPKMG
KVGLSYKGTT WGKIPDRLLD ASGRNRNVHW DYEAGELPPN LPLPGKLLTP EEATALLKEG
KAFSGASYSP DDEVFPPRDP KYEKQTLTYE QAARMWAEEK
|
|---|
| |