| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0350 |
|---|
| Symbol | |
|---|
| ID | 7296454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 396057 |
|---|
| End bp | 397352 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643593145 |
|---|
| Product | porin |
|---|
| Protein accession | YP_002490775 |
|---|
| Protein GI | 220915471 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.675543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGA CCCACAGACG CTCCCTGGCG CTCCTCGCGG CGCTCCTCCT CCCTGCGGCG
GCCTCCGCGC TGGAGGGCGA CGTGACCCTG TACGGCACGC TGATGCCGTT CTTCGACAAC
GCGCGCGTGT CCGACCCGAC GCGCCCCGGC CTCTCGCCCG CGACCGGCGG CGCGACGCAG
GTCTCCGATG CTGCGTACAC GGGCGTCGCC ATCCCGCAGC GCTTCCGCCT CACCTCCGGC
ACGTCCAACA TCGGGTTCAA GGGCGGGTTC GACGTGCTGG GCGAGGACCT GCAGGTGTTC
TTCCAGGTGG AGAGCGCGGT CAGCCCCGAC GGCGACGCGC CGAACGCCTG GGCCTCGCGC
AACAGCGCGG TCGGCGTGAA GGGCAAGTTC GGCCGCGCGT TCTTCGGCAA CTGGGACACG
CCGTACAAGT ACCCGGTGCT GCTGGTCGGC GCGGTCCGCG GCCTGAACCC GTTCGACAAC
ACCATCACCG CGAACCCCGG CTTCGGCGTC CCCGGCACCA CCACCCAGAG CGGCCGGGTG
AACGGGAAGG CCGACGCGGC CTTCAACCGC CGGCAGGGCA ACAGCGTCCA GTACTGGACG
CCCGAGCTCT ACGGGTTCTC GGCGCGCCTC GCGTACTCGG CCAACGAGTC GAGGACCGTG
GCGTCGGCCA CCGCGCCGTC CATCAGCCCG ACGATCTCCT CGGGCCTGGT GAGCTGGGCC
TACGGGCCGC TGCTCCTGCG GTACGCGTAC GAGCGGCACC AGGACTACTT CGGCCTGTCG
CAGCTGGGCG GCTCGCCGGT GTCGCTGACG AACCGGTCGT CCACCGACCA GGGCCACGAG
GCGATCGCGC AGCTGGCGCT CCCCACCGGG ACGCGCGTCT CGCTGGTGGG CGAGCGGCTC
TCCTACGAGA ACGAGGATCG GGCCGTGGGC GCGGTGCGCG AGTACGCCCG GCTGGCCTAC
TACGCGCTCC TGCAGCAGCG CTTCGGCGCG CACCAGGTGT TCGGCTCGTT CGGCCAGTCC
GACGCGGGCG AGTGCAAGGT GGTGGGCGGC GGCGCCTGCA CCGTGAACGG CCTCGGCGCC
ACGCAGTGGA ACGCCGGCTA CTCGTACGCG CTCACCAAGG CGGCGGACGT GTACGTCGCG
TACTACGAGA CGCGGAACGA CCGCTCCGCC AGCTACGGCG TGGTGGGCGG GCCGGGCGCG
GTCGCGCCGG GCGGCGACAC CCGCGGCTTC GGCCTGGGCC TGCTGTACAC GTTCGCGGCG
ACGGCCAACG TCGGCGCGCC GAAGGGTTCC CCGTAG
|
|---|
| Protein sequence | MNMTHRRSLA LLAALLLPAA ASALEGDVTL YGTLMPFFDN ARVSDPTRPG LSPATGGATQ
VSDAAYTGVA IPQRFRLTSG TSNIGFKGGF DVLGEDLQVF FQVESAVSPD GDAPNAWASR
NSAVGVKGKF GRAFFGNWDT PYKYPVLLVG AVRGLNPFDN TITANPGFGV PGTTTQSGRV
NGKADAAFNR RQGNSVQYWT PELYGFSARL AYSANESRTV ASATAPSISP TISSGLVSWA
YGPLLLRYAY ERHQDYFGLS QLGGSPVSLT NRSSTDQGHE AIAQLALPTG TRVSLVGERL
SYENEDRAVG AVREYARLAY YALLQQRFGA HQVFGSFGQS DAGECKVVGG GACTVNGLGA
TQWNAGYSYA LTKAADVYVA YYETRNDRSA SYGVVGGPGA VAPGGDTRGF GLGLLYTFAA
TANVGAPKGS P
|
|---|
| |