| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0039 |
|---|
| Symbol | |
|---|
| ID | 7296681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 40794 |
|---|
| End bp | 42320 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643592836 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_002490466 |
|---|
| Protein GI | 220915162 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCG CCGAGACCGC GATCCGCCCG ACCCGGGCCG AGAACTTCTC CGAGTGGTAC
CTCGAGGTCA TCAAGGCCGC CGATCTCGCC GAGAGCTCGA CCGTCCGCGG CTGCATGGTG
ATCAAGCCGT GGGGCTATGC GCTCTGGGAG CACGTGCAGC GGGTGCTGGA CGGCATGTTC
AAGGCCACCG GCCACGTGAA CGCCTACTTC CCGCTGTTCA TCCCGCTGTC GCTGCTCGAG
AAGGAGGCCG CGCACGTCGA GGGGTTCGCG AAGGAGTGCG CGGTGGTCAC CCACCACCGG
CTCGAGGCCC GCGACGGGAA GCTGGTGCCG GTGGGCGAGC TCGAGGAGCC GCTCGTCGTG
CGGCCGACCT CGGAGACCAT CATCGGGGAG AGCTTCGCGC GCTGGGTGCA GAGCTACCGG
GACCTGCCGC TGCTCATCAA CCAGTGGGCG AACGTCGTCC GCTGGGAGAT GCGGACCCGG
ATGTTCCTGC GCACGGCCGA GTTCCTGTGG CAGGAGGGCC ACACGGCGCA CGCCACCGAG
CAGGAGGCGA TCGACGAGAC CATGCAGATG CTCGGGATCT ACGCCCGCTT CGCCGAGGAG
TGGATGGCGC TGCCGGTGGT CCAGGGCGAG AAGACCGCGA GCGAGCGGTT CCCGGGCGCG
GTCCGCACCT ACTGCATCGA GGCGATGATG CAGGACCGCA AGGCGCTGCA GGCCGGCACC
TCGCACTTCC TCGGCCAGAA CTTCGCGAGG GCCTCGGGGA TCCAGTTCCA GGACGAGAAG
GGCGCGCTCA CGCACGCCTG GACCACGTCC TGGGGGCTCT CCACCCGGAT GATCGGCGCG
ATGATCATGA CCCACGGCGA CGACGACGGC ATGGTGTGCC CGCCGCGGCT CGCGCCGCAG
CAGGTGGTGA TCATCCCGGT CATCCAGAAG CCGGAGGTCC GCGAGCAGGT GCTGGCGTGG
TGCGCCGAGC TGAAGCGGGA GCTCGAGGCC CAGAGCTACG CGGGCGCCCC GGTGCGCGTC
CACCTCGACG CGCGCGACGT CCAGGGCGCG AAGAAGTCCT GGGAGTGGAT CAAGAAGGGC
GCGCCGATCC GGCTCGAGGT CGGCCCGAAG GACATCGAGA AGGGCGCGGT GTTCATGGGC
CGCCGCGACC GGAAGCCGAG GGAGAAGCAG AGCGTGCCGC GGGGCGAGCT GGTCGCCGGG
GTGGGCGCGC TGCTGCAGGA GATCCAGGAC GCGCTGCTAA GGCGCGCGCG GGCGGTGCGC
GCCGAGCACA CGCGGCCCAT CGACACGAAG GACGAGTTCT ACGCGTACTT CACGCCGCCC
GCGACCGTGC GGCCCAACGA TCCCACGCCC ATCCACGGCG GGTTCGCGCT CGCGCACTTC
AGCGGGGATC CGGCGGTCGA GGCCCGCATC AAGGAGGACC TCGGCGTCAC GGTGCGCTGC
ATCCCGCTCG AGCCGGGCGA GCCCGGCACC TGCCCGTTCA CGGGGCAGCC GAGCCCGAAG
CGCGTGGTCT GGGCGAAGTC GTACTGA
|
|---|
| Protein sequence | MASAETAIRP TRAENFSEWY LEVIKAADLA ESSTVRGCMV IKPWGYALWE HVQRVLDGMF
KATGHVNAYF PLFIPLSLLE KEAAHVEGFA KECAVVTHHR LEARDGKLVP VGELEEPLVV
RPTSETIIGE SFARWVQSYR DLPLLINQWA NVVRWEMRTR MFLRTAEFLW QEGHTAHATE
QEAIDETMQM LGIYARFAEE WMALPVVQGE KTASERFPGA VRTYCIEAMM QDRKALQAGT
SHFLGQNFAR ASGIQFQDEK GALTHAWTTS WGLSTRMIGA MIMTHGDDDG MVCPPRLAPQ
QVVIIPVIQK PEVREQVLAW CAELKRELEA QSYAGAPVRV HLDARDVQGA KKSWEWIKKG
APIRLEVGPK DIEKGAVFMG RRDRKPREKQ SVPRGELVAG VGALLQEIQD ALLRRARAVR
AEHTRPIDTK DEFYAYFTPP ATVRPNDPTP IHGGFALAHF SGDPAVEARI KEDLGVTVRC
IPLEPGEPGT CPFTGQPSPK RVVWAKSY
|
|---|
| |