| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0006 |
|---|
| Symbol | |
|---|
| ID | 7296647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 8265 |
|---|
| End bp | 8786 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643592802 |
|---|
| Product | peptidase zinc-dependent |
|---|
| Protein accession | YP_002490433 |
|---|
| Protein GI | 220915129 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1913] Predicted Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.655175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCAC CTTCGCACGT CCTGTTGATC GGCCTCGGCA ACGTGGGCCC GAAGACGCTC
GCCGAGGCGG CGCAGGCGCT CCGCGACGTG TACGCGCTCG CCAGCAAGGC GGGCCCGTCG
CTGGACCGGC CCCAGTACGC GTTCAACAAG GACCGCGGCC AGTACCACGC GCCCGCCATC
GTCCGCCGGC TGGCCGCGCT CCGCGCCGGC GCGGGCGGCG CCCCGGTGCT GGGCGTGGTG
GACGTGGACC TGTTCCTCCC CGACGCGGCC TACGTGCTCG GCGACGCGGA CCGCGACGCG
GGCGCGGCGG TGTACTCGGT GTCGCGCCTC GGCGCGGCCG ACCCCGCGCT GGCCCGGCGG
CGGATCCAGG TGGAGGCGGT GCACGGCGTC GGGCACCTGC TCGGCCTCTC GCACTGCCTC
GACTTCCGCT GCGCCATGTT CCTCTCGCGC GACGCGGCCG ACAGCGACCG CAAGGGGCCG
GGCCTCTGCG CGAGCTGCCG CGCCTCGCTC GCCCGTCCGT GA
|
|---|
| Protein sequence | MAAPSHVLLI GLGNVGPKTL AEAAQALRDV YALASKAGPS LDRPQYAFNK DRGQYHAPAI
VRRLAALRAG AGGAPVLGVV DVDLFLPDAA YVLGDADRDA GAAVYSVSRL GAADPALARR
RIQVEAVHGV GHLLGLSHCL DFRCAMFLSR DAADSDRKGP GLCASCRASL ARP
|
|---|
| |