| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8091 |
|---|
| Symbol | |
|---|
| ID | 7295651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | + |
|---|
| Start bp | 313314 |
|---|
| End bp | 314540 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643592613 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002490245 |
|---|
| Protein GI | 220914937 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGATC CCGGCACTCT CGGCCTGAGC GGGCCGACGC CGCGCGAGAG CACCCAGGCG
GGTGACCTCG TCCGCAGCCT GGTCATCGGC CTGATGGCCT TCCTGACCGT GGTGGACCTG
TTCGCCACCC AGGCCATCCT CCCGTCCCTC GCCCGTGCCT ACGCGGTGAG CCCGGCGGCC
ATCGGCTTCG CCGTCAACGC GACCACGCTC GGCATGGCCC TCGGCGGTCT CGGCGTGGCC
CTGCTCGGCC CGCGCATCGA CCGCCGCCGC GGCGTGGTCG TCAGCCTGCT GCTCCTTGCC
ATCCCGACCG CCCTGCTCGG GACCCTGCCC GACCTCTGGC TCTTCGCCGC CCTCCGGGTG
CTGCAGGGCA TCTGCATGGC GGCGGCCTTC ACGCTGACCC TCGCCTATCT GGGCGAGGCC
TGTTCCGCAT CGGCCGCGGC CGGCGCCTTC GCGGCCTACG TGACCGGGAA CGTCGCCAGC
AACTTCGTCG GCCGGCTCGC TGCTGCGGCT CTCGTCGACC ATCTCGGGCT GGTCTCGAAC
TTCCTCGCCT TCGCGCTGCT GAACCTCGCC GGCGCCGGCC TCGCCGCCCT CGTGCTGCGC
GCGCCCAAGC CCGAACCGAA GGCGGATATA GGCCGGCACG GGCGAGCCTC GCCGTTCGCC
GTCTGGGCCG AGCACCTGGC GAACCCGACG CTCCTGGCCG CCTTCGGCAT CGGCTTCTGC
ATCCTGTTCG CCTTCCTGGG GACGTTCACC TACGTGAACT TCGTCCTGAC CGGCTCGCCC
TTCCTCGTCG GGCCGATGAC GCTGGGCTTC GTCTACTTCG TCTTCCTCCC CTCGCTGCTG
ACCACGCCGC TGGCTGGACG CTTCAGCGGA CGGCTCGGGT TCAGACGAGC CCTGGTCATG
GCGCTCCTGA TCGCCGTGCT CGGCCTGCCG CTGCTGACGT TCCCGGCCCT GCCGGTTGTC
CTGATCGGCC TCGTCCTGGT CGGGATCGGC ACCTTCCTGG CTCAAGCCAT CGCGACGGGC
GTCGTCGGCC GGTCCGCGAT GGGCGAGCGG GCCTCGGCGA GCGGTCTCTA CCTGCTGTTC
TACTACCTCG GCGGGCTCGC CGGCACGGCC GTCCTCGGGC AGGTGTTCGA GCGCCTCGGC
TGGGGGGCCT GCGTGGTCGG AGTGACGGCC TCGCTCGCTC TCGCCGCGGC TCTGACCACG
CACCTGTGCG AGCCAAGTGC GACCTGA
|
|---|
| Protein sequence | MPDPGTLGLS GPTPRESTQA GDLVRSLVIG LMAFLTVVDL FATQAILPSL ARAYAVSPAA
IGFAVNATTL GMALGGLGVA LLGPRIDRRR GVVVSLLLLA IPTALLGTLP DLWLFAALRV
LQGICMAAAF TLTLAYLGEA CSASAAAGAF AAYVTGNVAS NFVGRLAAAA LVDHLGLVSN
FLAFALLNLA GAGLAALVLR APKPEPKADI GRHGRASPFA VWAEHLANPT LLAAFGIGFC
ILFAFLGTFT YVNFVLTGSP FLVGPMTLGF VYFVFLPSLL TTPLAGRFSG RLGFRRALVM
ALLIAVLGLP LLTFPALPVV LIGLVLVGIG TFLAQAIATG VVGRSAMGER ASASGLYLLF
YYLGGLAGTA VLGQVFERLG WGACVVGVTA SLALAAALTT HLCEPSAT
|
|---|
| |