| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7915 |
|---|
| Symbol | |
|---|
| ID | 7295564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | - |
|---|
| Start bp | 142838 |
|---|
| End bp | 143830 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643592458 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002490090 |
|---|
| Protein GI | 220914782 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0435476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGG AGGACATTTC TATTGACGGC CGCGATATGT CTCTGAGGGA GAGAAAGTTG
TGCTGGCAGG CACTTGTCGG CGAGCATTTG GCCGATGTCG AACTCGACGC CTCCCCCGAT
ATTCCCGCAG GTGAGGCATT CGCCGGGACG CTTCGGATCC GAAGCTTCGA GCGCGGCACG
CTCGCAGACA TCGCCAGCGG GGGACAGGTG CTCACCCGCA CGGCCGATCG CATCCGTCGG
GCGAAGTCCG ACGCGGTCCT GTTCAATATC ATCCTCTCGG GGCATTGCCG CCTCGAGCAG
GACGGGCGCC AGGCTGTACC AACGGCGGGC AGCCTCTTCC TCTATGAGAG CGCGCGTCCC
TACCACATCG AGACCTCGCC CGATTTCCGC ACCATTGTCG TCATGATCGA CCGCGGACGG
CTCGAGAGGA GCCTCGGAAA TCTGCGCTTC TATACCGGAC GAGCGATGTG CTCGGTCGAC
ACGGTGGCGC GCATTGCAGG CTCGTTCTGG CAGACTCTCT CGAGTCAACT CGACGGCGTT
CCGGATGCTG CGGCCAACAC GCTGATCGAA GCCGGCATCG ACGTCGTCAT CCCCGCTCTG
AGGTCGATGG CGGGTGACCG GGCAGAGGGA TCGGAAGCCT GCGAACTGAC GGTCATGCGC
GCCACGGCGT TCATCGCCAG CGCCTTCCAC AGGGAGAGCC TGACCGTCGA CGACATTGCC
GCGGCCGCCG GCGTTTCGAC GCGCCGTCTC CAGGAATGCT TCAAGGAAAA GGGGCTCACG
CCGATGGAGC AGTTGCGCAA GCACCGCCTG AAGCACGCCC ACGATCGCCT GAACGACGGC
CATTGCCAGA ACCTGTCGGT CCTCAGCATC ATGAGCCAGT CGGGCTTCAG CGATCCGGCG
CATTTCAGCC GGGCGTTCCG CAAGGAATAC GGCATATCCC CATCGGCTGC TCGATCCGCC
TCGCAGCGCC GCCCCGCAGT TCGGGTCGCC TGA
|
|---|
| Protein sequence | MPLEDISIDG RDMSLRERKL CWQALVGEHL ADVELDASPD IPAGEAFAGT LRIRSFERGT
LADIASGGQV LTRTADRIRR AKSDAVLFNI ILSGHCRLEQ DGRQAVPTAG SLFLYESARP
YHIETSPDFR TIVVMIDRGR LERSLGNLRF YTGRAMCSVD TVARIAGSFW QTLSSQLDGV
PDAAANTLIE AGIDVVIPAL RSMAGDRAEG SEACELTVMR ATAFIASAFH RESLTVDDIA
AAAGVSTRRL QECFKEKGLT PMEQLRKHRL KHAHDRLNDG HCQNLSVLSI MSQSGFSDPA
HFSRAFRKEY GISPSAARSA SQRRPAVRVA
|
|---|
| |