Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Achl_3554 |
Symbol | |
ID | 7295035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter chlorophenolicus A6 |
Kingdom | Bacteria |
Replicon accession | NC_011886 |
Strand | - |
Start bp | 3943494 |
End bp | 3945386 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643591960 |
Product | polysaccharide deacetylase |
Protein accession | YP_002489599 |
Protein GI | 220914290 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACTA CCGGCTGCGA GCCCGTGGAA GAACTGCCTC CGCGCGAGGG TGCCCGGCGG GGACTGCTCC GCCGGGCCAA ATCCTTGGTG ACCGTGGCGG CCGCCCTGGC CCTGGCCGTC GCCGGCCTGG CGATGAGCCC GCCCGCAGCC CATGCTGCCG CGCCCACGGT GGTCAGCCTG ACGTTCGACG ACGGCCACGC GGACCAGCTG GCGGCAGCCC AGACCATGAA CTCGCTGGGA CTGAAGGGGA CTTTCTACGT GACCTCCGGC GTCGTAGGCA CCCCCAACTA CTTCACGCTC GCCCAAGTCC AGGCGCTGGC GGCCGCAGGG CATGAAATCG GTGGCCACAC CGTCACCCAC CCGGACCTCA CCACCCTGCC CAGCGATGAA GCCACGCGGC AGGTCTGCAA CGACCGCGTC AACCTCAGCA ACTGGGGTTT CCGGGTGACC AGCTTCGCCC ACCCGTTCGC GGCGGCCAAC GCCGGCACCG AGGCGATCGT GCGGAACTGC GGCTACAACA GCGCCCGCGG GCTGGGCGAT ATCCGCACCC GGTTCAGCTG CGGTACGTGT GCGGTGGGCG AATCCATCCC GCCGGCCGAC CCCTATTACA CGGCAGCGCC GGACCAGGTG GAAAACACGT GGACGCTGGC AGATCTCCAA CGGAGCGTCA CGCAGGCCGA GAACGGAGCC GGCGGCTGGG TCCAGCTGAC GTTCCACCAC ATCGCCAATA ACCCTTCCGA CTCCATCACC ATCTCGCCCA CCCTGTTTAA CCAGTTCGCC AACTGGCTGA AGACCCGTCC CGCCACCACC ACCGTCAAAA CGGTGGACCA GGTCATCGGC GGGACGGTCA AGCCACTGGT GTCAGGGCCG GCCGTTCCGC CGCCCGGCAC CGGCAACCTG GTCAAGAACC CGGGCTTTGA AACGCTCACC AACGGCGCTC CCCAGTGCTG GCAGCAGGGG GGATACGGAA CCAACACCCC CACTTTCAGC ACGGTCAACC AGGGCCGGAC CGGCAGGGGA GCCCAAGTGG TGATGCGGAG CTACACCAAC GGTGACGCCA AATGGCTGCC GTCCCTGGAC CTGGGCGGAT GCTCACCCGC GGGAACGGCC GGGCACAGCT ACAACCTGGG CATGTGGTAC AAATCCACTG TTCCAACGCA GTTCGCCCTG TACTACCGCA GCGGAATAGG CTCCTGGACC TACTGGACCT CAAGCCCCTG GTTTGCAGCG GCAACCACGT TCCAGAAGGC CACCTGGACC ACTCCGGCCC TTCCCGCCGG CGCAAGCGGC ATCAGCTTCG GCCTGAACAT CTTCAGCAAC GGCTCGCTGG TCACCGATGA CGCCGAGATG TTCGACGCCG CCGCAACGCC GCCGCCGCCC CAACCGGCGG CGGGTGCGAA CCTCGTGCAG AACGCCGGGC TGGAAACCGC TGGCACCGGC ACCCTTCCGC AGTGCTGGCA GGCGGCTGGC TTCGGCACGA ACACCCCCAC TTACACCACC CTTGCCAGCG GTGCCCATTC CGGCACCAAG GCCGTCCGGC TGGTGATGAG CAACTATTCA AACGGTGACA GCAAGCTGCT TCCGGCCCTG GACTCCGGTT CCTGCGCTCC ACCTGCCATC GCCGGCAAGA CCTACTCGCT GCGTGCCTGG TACACCTCCA CGGCCACCAC CCAGTTCGCG GTCTATTACC GTAACTCCGC AGGCACGTGG GTGTACTGGA CCTCCAGCCC CTGGCTCGCG CCGGCCGCCA CGTACACGCA GGCCAGCTTC ACCACGCCGG CACTGCCGGC GGGGGCCACC GCCATCAGCT TCGGCCTCAA CCTCTTCAGC AACGGCACCC TGATCACGGA CGACTACGCG ATGTACGACA CTGTGGGGGC TCCGGCGCTG TGA
|
Protein sequence | MKTTGCEPVE ELPPREGARR GLLRRAKSLV TVAAALALAV AGLAMSPPAA HAAAPTVVSL TFDDGHADQL AAAQTMNSLG LKGTFYVTSG VVGTPNYFTL AQVQALAAAG HEIGGHTVTH PDLTTLPSDE ATRQVCNDRV NLSNWGFRVT SFAHPFAAAN AGTEAIVRNC GYNSARGLGD IRTRFSCGTC AVGESIPPAD PYYTAAPDQV ENTWTLADLQ RSVTQAENGA GGWVQLTFHH IANNPSDSIT ISPTLFNQFA NWLKTRPATT TVKTVDQVIG GTVKPLVSGP AVPPPGTGNL VKNPGFETLT NGAPQCWQQG GYGTNTPTFS TVNQGRTGRG AQVVMRSYTN GDAKWLPSLD LGGCSPAGTA GHSYNLGMWY KSTVPTQFAL YYRSGIGSWT YWTSSPWFAA ATTFQKATWT TPALPAGASG ISFGLNIFSN GSLVTDDAEM FDAAATPPPP QPAAGANLVQ NAGLETAGTG TLPQCWQAAG FGTNTPTYTT LASGAHSGTK AVRLVMSNYS NGDSKLLPAL DSGSCAPPAI AGKTYSLRAW YTSTATTQFA VYYRNSAGTW VYWTSSPWLA PAATYTQASF TTPALPAGAT AISFGLNLFS NGTLITDDYA MYDTVGAPAL
|
| |