Gene Achl_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAchl_2012 
Symbol 
ID7293473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter chlorophenolicus A6 
KingdomBacteria 
Replicon accessionNC_011886 
Strand
Start bp2268498 
End bp2269358 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID643590416 
ProductShikimate dehydrogenase substrate binding domain protein 
Protein accessionYP_002488075 
Protein GI220912766 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000000136382 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTGC GGGCAGCAGT GCTGGGGCAC CCGATCAGCC ATTCGAAGTC CCCGGCCCTG 
CATTTGGCTG CCTACCGGCA GTTGGATGCA GACATCAGCT ACACGGCAAT CGACGTCACC
GAGCAGCTCC TTCCGGGACT GATGGGGCAG GTCCGCCGCC AGCCTGGATG GTGCGGGCTT
TCGGTCACCA TGCCGTTGAA GACCGCCATG CTGGGCCATG TGGACGAGGT CCGCGGCATC
GCCCGGACCC TCGGCGTGGT CAATACTGTC TCGTTCGAGG ACGACGGGCA CGGACCACGT
GCCATCGGCT CCAACACCGA TGTGGCTGGA ATCGTCAACG CCCTCCGGCA CGCGGGAGCG
AACGCCGCAC CCTCCGCGGT CATCCTCGGC GGCGGCGGCA CCGCGGCTTC CGCGGTGGCC
GCACTGCAGG AGCTCGGAAC CCGGCGTGTG CAGATCTTCG CACGGGACCC TGCACGCACC
GCAGACGTCC GTGCGGCGGC CGCAAGCGCC GGCGTCGGGG TTGACGTGCT GACGCTGGCC
GAAGCCGTGC TCCCCACGGC TGCTGCCGAC GTCGTGATTT CCACCCTGCC GCCCCGGGCG
GCGGACGGGC TGGCAGGAGA GCTGGCCGCC CTGAAGACCG AAACGCCGGG CGTCCTGCTG
GATGTCGCCT ACGACCCCTG GCCCAGCCTG ATCGCCTCGG TGTGGCGGGC GGGCGGCGGT
GCCGTGGTCC CCGGACTGGA GATGCTGCTG TACCAGGCAG TGGAACAGGT GCGCCTTTTC
ACGGGCCGCG GGGATGACGT TAATGCAGCT GTCATAGATG TGATGTGCGC CTCAGTCGGC
CTTCCCCGAC GGGCTTTGTA A
 
Protein sequence
MTLRAAVLGH PISHSKSPAL HLAAYRQLDA DISYTAIDVT EQLLPGLMGQ VRRQPGWCGL 
SVTMPLKTAM LGHVDEVRGI ARTLGVVNTV SFEDDGHGPR AIGSNTDVAG IVNALRHAGA
NAAPSAVILG GGGTAASAVA ALQELGTRRV QIFARDPART ADVRAAAASA GVGVDVLTLA
EAVLPTAAAD VVISTLPPRA ADGLAGELAA LKTETPGVLL DVAYDPWPSL IASVWRAGGG
AVVPGLEMLL YQAVEQVRLF TGRGDDVNAA VIDVMCASVG LPRRAL