| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5265 |
|---|
| Symbol | |
|---|
| ID | 7291220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 5372247 |
|---|
| End bp | 5373437 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643588221 |
|---|
| Product | putative inner membrane protein translocase component YidC |
|---|
| Protein accession | YP_002485917 |
|---|
| Protein GI | 220910606 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.298805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0483383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCG GAATAGGATT TCTCTCTGAT AATGTAATGC TGCCGATCCT GGACTTTTTC
TACGGGATCG TCCCCAGCTA TGGTTTAGCG ATCGTCGCCC TCACGCTGGT GATTCGTCTG
GCCCTTTACC CTCTCAGTGC CGGTTCGATC CGCAACATGC GGCAGATGAA AATCGTGCAG
CCGATGATGC AGAAGAAGGT AAAGGAAATC CAGGAGAAGT ACAAAAATGA CCCAACTGGC
CAGCAGCAGG CTATGTCTGA GGTCTATAAG GAATTTGGCA ATCCCCTGGC AGGTTGTTTT
CCCCTGCTGT TGCAAATGCC AATCCTGTTC GCCCTATTTG CCACCCTGCG GGGTTCGCCT
TTTTCGGATG TCAATTATCA GGTGAATGTG CAAATTCTAC CCAGGGAGCA GATTGAACAG
ATCCAACCCC AGGTGTTTAT GACCAAACCG CAAAACATTT ACCTGGCCGA TGGGGTGCAT
CAGTCGGTTC TGGCGATCTT ACCGGGGGGT AACCATCTGG CGGTGGGACA GGAAACGGAT
TTGAATTTTC AAACCCCTCA GGGTAAACCC CTGGACGCTC TGGTCTCCGA CTACCCAGAC
AGCAATCTGC AGCCCCATTG GACCGTGTTG CGCGGTCAGG AACGGGTCAA GCTGGATGAA
AAGGGCCATC TGGTCGCTCT GCAGCCGGGA GATGTCACCC TGCAGGGAAC GGTGCCTGGC
ATTGCGTCTG ATAAGGGATT CTTGTTTATC GATAAGCTGG GCCATGTTGG AGCGATCGAT
AACGATCTGT TTACCACCGC CCCGGATGGC AGTAAGCAAT TTAATTTCGG TGCGATTCAC
CTGGATGTAC TGATCATGAT CCTGGGCTTT GGGGTCAGCC TTTACATTAA CCAGATCCTT
TCCGGTCAGG GTTCCACTAG CAACAATCCC CAGCAAAACA CCGTGAATCA GATGACCCCG
ATCATCTTCT CTGGCATGTT TCTATTCTTT CCTCTGCCAG CGGGTGTGCT GCTTTATATG
CTGATTGCCA ATATCTTCCA GACCCTGCAA ACGTTTCTCA TCCTTAAAGA ACCGCTGCCC
GAAAATATTC GTAAGCTGGC AGAGGAGGAA ACCAAGGCGG AGGAGCTGAA AAACAGGCAG
ACCCTTCCCT TTGAACCGGG TCGATCCAAA AAGAAACCTT CTGGTGGTTA G
|
|---|
| Protein sequence | MDFGIGFLSD NVMLPILDFF YGIVPSYGLA IVALTLVIRL ALYPLSAGSI RNMRQMKIVQ
PMMQKKVKEI QEKYKNDPTG QQQAMSEVYK EFGNPLAGCF PLLLQMPILF ALFATLRGSP
FSDVNYQVNV QILPREQIEQ IQPQVFMTKP QNIYLADGVH QSVLAILPGG NHLAVGQETD
LNFQTPQGKP LDALVSDYPD SNLQPHWTVL RGQERVKLDE KGHLVALQPG DVTLQGTVPG
IASDKGFLFI DKLGHVGAID NDLFTTAPDG SKQFNFGAIH LDVLIMILGF GVSLYINQIL
SGQGSTSNNP QQNTVNQMTP IIFSGMFLFF PLPAGVLLYM LIANIFQTLQ TFLILKEPLP
ENIRKLAEEE TKAEELKNRQ TLPFEPGRSK KKPSGG
|
|---|
| |