| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4972 |
|---|
| Symbol | |
|---|
| ID | 7290925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 5054615 |
|---|
| End bp | 5055451 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643587933 |
|---|
| Product | hopanoid biosynthesis associated protein HpnK |
|---|
| Protein accession | YP_002485631 |
|---|
| Protein GI | 220910320 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03473] hopanoid biosynthesis associated protein HpnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCCGTC GTGCCGTCAT TAATGCCGAT GACTTTGGGT TTTCCCCGGC AGTGAATCAG
GCCATTATTA CCGCCCACCG GGAAGGAATT CTGACCAGCA CGAGTTTAAT GGTCACAGGA
GCCGCTGCAG ATTCGGCGAT CGAGCTAGCC TACCAGCATC CCAACCTGGG AGTAGGTTTG
CATCTGGTCC TGGTCAGTGG CCGGTCTGTA TTACCGCCTG CCAAGATTCC CCATCTGGTG
GATGCAACGG GAGAGTTTCC CAACAGTTCC CTCCAGGCGG GTCTGACCTA TCAGTTCAAT
CGGGCTGCTC GGGCCGAACT GCAGTTAGAA ATCCGGGCCC AACTGGAAAA ATTTCGTCAG
AGCGGTCTGC CCCTCACCCA CGTGGACGGA CACAAGCACC TCCACTGCCA TCCGGTGGTG
ATAGATATTC TGGTCAGCCT GGCCCCGGAG TTCAACATTC CCCTCATTCG CCTCCCCCAG
GAAGAACTGC AGTTGAACCT GAACTGGGAA CGGCAGGACT GGTTGCGGAA AACCCTGTGG
TGGTGGATTT TTAACCAACT GGGCCAGTAT GGCCGATCGC GGCTAGAGGC AGCGGGGATT
CAATCCATGC AGCGGGTGTA TGGCCTTTTG CAAACTGGTC GGATCAGTGA GGACTACCTG
CTGGATCTGA TTCCGCAAAT TCAGGCGGAT GCAGTAGAAA TCTATGCTCA TCCCGTTGCC
CCCCTCAGGG GTGAACCGGC TAACTCCCAG GGCGCGGTAG AATTGGCAGC TTTACTCAGC
CCCCGAGTGC GAGATAGTTT ACTCCAGGCA GGTTTCGAGT TAGTGCCCTT CAATTAA
|
|---|
| Protein sequence | MSRRAVINAD DFGFSPAVNQ AIITAHREGI LTSTSLMVTG AAADSAIELA YQHPNLGVGL
HLVLVSGRSV LPPAKIPHLV DATGEFPNSS LQAGLTYQFN RAARAELQLE IRAQLEKFRQ
SGLPLTHVDG HKHLHCHPVV IDILVSLAPE FNIPLIRLPQ EELQLNLNWE RQDWLRKTLW
WWIFNQLGQY GRSRLEAAGI QSMQRVYGLL QTGRISEDYL LDLIPQIQAD AVEIYAHPVA
PLRGEPANSQ GAVELAALLS PRVRDSLLQA GFELVPFN
|
|---|
| |