| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4596 |
|---|
| Symbol | |
|---|
| ID | 7290549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 4675861 |
|---|
| End bp | 4677126 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643587566 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002485265 |
|---|
| Protein GI | 220909954 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.227831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCCC TCTCGACTCG TCAGCGCTTA ATCCAGGCAG CCCTGGAGCT GTTTCTGTCC
CAGGGAATCA GCAATACCAC CACCCGGCAG ATTGCCAACC TGGCGGAAGT AAACGAAGTC
ACGCTGTTTC GGCAATTTGG CAATAAGTAT GGCTTACTCC TGGCGGTTGT GGAGGAGTCT
CCCACCTTTA CTCAATTGGG AACAGTCCTG AACCAACACC TGGCCCAGAC GGGTTCAGTG
GGGGAACTGC TGCACCAGTA TGCAAGTATT TACTTACAAA CATTACAGCG GGTCCCCGAC
TTTGTCCGCT CCTTAATTGG AGAAGCTGAA CAATTTCCCC CCCCCAATCG CCAGGCAATT
GCCACTCAGT TAAGCCAGAT GAATAGGGTT CTGGCCGAGG CACTGACCGC CATGCTCCCG
CAGATGGGGC AGGCCCAGCT CGATCCCACG GCGATCGCCA CGCTGCTGCA GGGGTTAGTG
CTCGGCTATG CGGTAATCGA GTTAACCACT GATCAGCTTC CCCTCGATCG GGAGGTGTTT
CTGGACCACC TGGTTCACCT GTTTTTGCAG GGTGCGCTGG CAGAACGGTC CTCTTCTGAT
CTCAGCCCCA GTTCCAGCCT GGCCCTGGCC CTACCCGCAA GTCTGCCACC CCTAGAGCCG
GATGGGATTG CAGATTTACC CCCTCCCCTG GTACATCGCA TTCTACAAAA GGCGCGGGAA
ACCGGGTTAC AGGACTATGC CCTGGCCTAT GTGTTATTTG CGACGGGATT ATCTGTTGAG
GAAATTGCCC GTTTGCACAG GGTCGATCAG ATCAGTGATC CGCAACAGCA CCTGCTCCAG
GTCAGTTCGG AACGGGGGGG GCGATCGGTG CCCGTCAACC AGTGGATTCT GGGTAAACGC
TACGGTTCCT ATACCAACAA TCCTCTGACC AAATGGCTGA AAAGTCGTAA AGATGAGCAT
CCGGCCCTGT TTGTCGATCG GGGGGAGCCT CTGAGTGTCA CGGGTATGAT CCAGCTCTGG
CAGGGGTGGA CAGCAGGGCT ACAAACCCTG GGGGGAAAGG TTCCAGCGAT CGCTCAGGCT
GAACAAACCT GGTGTGTCGA AATGCTGATG CGGGGCATAA GTGTGGAAAA TCTCAGCCTG
CTGACCAGCT GGGAACCGGC CCGTCTCCAA CCCTATGTCC AGAGAGCTAG AGAAAAACTT
GCGCTGGAAC AGGCCCTGCA ACTGGATCGC AAATCCCCCG GTAGCCAGGC TCAGGTTGGG
GAGTAA
|
|---|
| Protein sequence | MSPLSTRQRL IQAALELFLS QGISNTTTRQ IANLAEVNEV TLFRQFGNKY GLLLAVVEES
PTFTQLGTVL NQHLAQTGSV GELLHQYASI YLQTLQRVPD FVRSLIGEAE QFPPPNRQAI
ATQLSQMNRV LAEALTAMLP QMGQAQLDPT AIATLLQGLV LGYAVIELTT DQLPLDREVF
LDHLVHLFLQ GALAERSSSD LSPSSSLALA LPASLPPLEP DGIADLPPPL VHRILQKARE
TGLQDYALAY VLFATGLSVE EIARLHRVDQ ISDPQQHLLQ VSSERGGRSV PVNQWILGKR
YGSYTNNPLT KWLKSRKDEH PALFVDRGEP LSVTGMIQLW QGWTAGLQTL GGKVPAIAQA
EQTWCVEMLM RGISVENLSL LTSWEPARLQ PYVQRAREKL ALEQALQLDR KSPGSQAQVG
E
|
|---|
| |