| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4503 |
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| Symbol | |
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| ID | 7290456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 4574756 |
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| End bp | 4577050 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643587475 |
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| Product | VacB and RNase II family 3'-5' exoribonuclease |
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| Protein accession | YP_002485174 |
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| Protein GI | 220909863 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.790425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTT CAATTAAGAA TCTGCTGGAC AACTTTGCCG ACGATAAGTT AGTTGCCCCC
AAGGTGCTGG AAAAAAAGAT GGGCTGCGAG GATGATCCAG CTAATCTGCA TCAGTTACAG
ATCGCTTTAG ATGCTTTAGA GCGGGTGGGC ATCCTCGTGA AGGAGCGAGG CAAGTATCGG
CGGGTGAAGG ATGAAAACCT GGTGGAGGGC AAGCTGCGCT GCTCCAGTAA GGGGTTTTGT
TTTGCGATCC AGGATGATGA CAGCAGTGAG GATATCTATA TCCGGGAAAG CCAGTTGAGT
AATGCCTGGA ATGGCGATAG AGTGCTGGTT CAGGTTACGA AAGAAGGCCG ACGGCGACGC
AGTCCTGAAG GAGAGGTGCG GTTAATTCTG GAGCGGGGAA ATCCCTCTGT GCTGGCTCGG
GTGCGACGGC TTGAGCAGGG CTGGCGGGGC AAACCCCTGG ACGATCGGCT GTTGTTTGAA
CTGGAACTTC TCCCCAGTGA GGCGGTGACG GATCTGGAAC TGGCAGAGGA GCAACTGGTT
CACGTTGAAA TTGTCCGCTA TCCCCTGGGG CAGTATCCTC CTCTGGGCAA AATTACTCAG
ATTTTGGGCA ACGATGCCCA ATCGGCGGCA GATACGGAAC TGGTTTGCTG TAAGTATGGC
TTGAACCGTA ATTTTTCTGA GGCGGTGCGA ACCGTAGCAG CCAGTTTACC CAGCAAATTG
AAGAAAACCG ATCTGAAAAA TCGGCTGGAT TTACGATCGC TGCTGACCCT GGCCATTACC
GACGAACTCC CGGGCAGTGC CTTTGTGGAT GCGGCCTTCA GTCTGGTGCA AACCCCCACG
GGTGACTGGC AATTGGGAGT CCATATTGCG GATGTCAGCC ACTACGTTAC TCCTGATAGT
CCCCTTGATC GGGAAGCCAG TCGCCGGGGC ACCACGATTT GCCTCCGGGG AGTTACTCTG
CCCCTGTTGC CCGAATCTCC CCTGGGATTT GTGCCGGATC AGGAGCGTCT GGCCGTTTCC
CTGCTGGTAA CGCTCAATGG TGCGGGGGAA GTGCTGGAGT ACGAACTGCA GCCCTCGGTG
ATCCAGGTGG ATCAGATCCT GAATTCAGCC CAGGTCCAGG CAATTTTGAC CCCTGGCGAG
GCTTCCCCAG AGATGCCCCC AGCGGTGACG GAAGAGGTAA CGCAACTGGC TCGGCTCAGT
CAAGCGCTCC ACCAGCAACG TTTTCAGCGG GGAGGGTTTG AAATTTCTCT GGCTCAGGCT
TACCTGCATA CCTACGATGA CGAAGGCTTG CTTCCGGCTC TGACCGTTAC CCCCGCCGCG
ATCGCCCACT CGTTAGTGGC AGAGTTCCTC TTGCTGGCCA ACCAGACTAT CATTTCTCAC
CTCCAGACCT TAGGGGTGCC AGCAGTCTAC CGGGTCCAAT CCCCGCCTGA GCTTTACGAC
GTCCAGGAAT TGATCAAACT GACCGGTAAT CTGGGTATTC CCCTTAGCCT CAGTCAAGAG
GATACCGTTC AGCCCCAGGA TTACCAGAAC TTTATCCGCC AGCTGGCTAC CTCCGATGTG
GCCCCCCTGC TGATGGAATT GTTGCTGGAG ACTCTCAAGC CTGCCAGCGA TAGTGCCGTT
TCTGGTCCCC ATTTCAGTCT TGCTTCGGTA CAGGGCTATG GCCATTTCAC CGCCCCACTG
CGCCGCTATA CGGATATTCT CAACCACCGG GTGCTGCATG CCATTTTTAC TGAAGGTCGC
GATCGCCGCA GTAGTCGCTC TAAGGAACAG GTGAATTTGC GCCACAGTTC TGCTGTTGGT
GAGATCAGCT GGAATGTCCT CCCCCCCGAA ATCCAGCGGG AGTTAGAATC GGCCATCACC
CTCCATCTGC CCCATCTGCA AGAGCGGGAA AAAGTGGCCC TGCAGGTGAT GAAAGACCTG
GATGGGCTGA TGAAAGTCAA ACAGATGCAG GAGCGCACCG GGGAAGTGTT CCGTGGTTTA
ATTACCGGCA TTCAATCCTA CGGTTTTTTT GTGGAACTGG AAGAATTGAT GGTGGAAGGT
CTGGTGCATG TCAGCTCGCT CCGGGATGAT TGGTACGAAT ACCGCTCCCG TCAGCAAACC
CTGATTGGAC GTAAAAATCG GCGTCAGTAC CGCCTTGGCG ATCGAGTGGA AGTTCAGGTG
AAAAATGTTG ATTACTACCG CCAGCAAATT GATCTGGTAG TTGTGGGTGG GGGGAGTGAA
GCCACCGAAG AAGACCTGGA GGAACCCGGT GTTGGTCCGG AAACTCCCTC CAACATGGAA
GCAGAACTGG AGTAG
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| Protein sequence | MELSIKNLLD NFADDKLVAP KVLEKKMGCE DDPANLHQLQ IALDALERVG ILVKERGKYR
RVKDENLVEG KLRCSSKGFC FAIQDDDSSE DIYIRESQLS NAWNGDRVLV QVTKEGRRRR
SPEGEVRLIL ERGNPSVLAR VRRLEQGWRG KPLDDRLLFE LELLPSEAVT DLELAEEQLV
HVEIVRYPLG QYPPLGKITQ ILGNDAQSAA DTELVCCKYG LNRNFSEAVR TVAASLPSKL
KKTDLKNRLD LRSLLTLAIT DELPGSAFVD AAFSLVQTPT GDWQLGVHIA DVSHYVTPDS
PLDREASRRG TTICLRGVTL PLLPESPLGF VPDQERLAVS LLVTLNGAGE VLEYELQPSV
IQVDQILNSA QVQAILTPGE ASPEMPPAVT EEVTQLARLS QALHQQRFQR GGFEISLAQA
YLHTYDDEGL LPALTVTPAA IAHSLVAEFL LLANQTIISH LQTLGVPAVY RVQSPPELYD
VQELIKLTGN LGIPLSLSQE DTVQPQDYQN FIRQLATSDV APLLMELLLE TLKPASDSAV
SGPHFSLASV QGYGHFTAPL RRYTDILNHR VLHAIFTEGR DRRSSRSKEQ VNLRHSSAVG
EISWNVLPPE IQRELESAIT LHLPHLQERE KVALQVMKDL DGLMKVKQMQ ERTGEVFRGL
ITGIQSYGFF VELEELMVEG LVHVSSLRDD WYEYRSRQQT LIGRKNRRQY RLGDRVEVQV
KNVDYYRQQI DLVVVGGGSE ATEEDLEEPG VGPETPSNME AELE
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