| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4119 |
|---|
| Symbol | |
|---|
| ID | 7290068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4158588 |
|---|
| End bp | 4162583 |
|---|
| Gene Length | 3996 bp |
|---|
| Protein Length | 1331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643587092 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002484794 |
|---|
| Protein GI | 220909483 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCC CAGATCGCAC CATTTTGGTC ATTGATGTTT TACCCGGCAG TGCTGCACCC
TATCAATGCC TGCTCCAGCC AGCAGCCGAG GGTTTGTATC GGGTCATAAC CGAATCCTAT
AATGGTCCAA TCTTAGCTTT GTGCCGCTCT GCTCGGGTAG ATGCCATCCT TTTAGAGTCT
CGCTTTCCTG ATCCTCAGGG CTTGGACGTG CTGGATCAAC TGAAAGCCCA GCTGGGAGAG
CAGTGCCCGC CGATCATCGT GATTGATCAG AACGACGCTA ACCTAGCCAA ACGAGCATTA
AAGGCAGGGG CGGTGGACTA TTTGATCAGA AGCCAAATCA CTTCTGAAAT CCTCTACCAA
GCTGTCAGCA TGGTGATCTC AACCGATGGC AAAAGCCACG ATGCCGAACG ACCCAAGACA
GAAGCCGCCC TGCGTGAATC GGAAGCCCGG TTGCAGGCTG TTACCAACCT CGTGCCCGAT
CTGCTGTGGG ATAGTGAACC GGACGGCTCG ACCAACTGGT ACAACCAGCG CTGGATGGAA
TATACGGGGC AAACCTTTGA GCAAGCGATC GGCTGGGGCT GGATAGACGC GATTCACCCG
GACGATCGGG AAGGGTCAGC GCGGCGTTAC CGGGAAGCTG TCGAACAGGG CGTACCGCTG
CAACAGGAAC ACCGCATTCG TCGGCATGAT GGAGCCTATC GCTGGTTCGG CGTCAAGGCT
TCGCCGCTCA AGGATGGGAG TGGCAAGGTT GTCAAAATGT ACGGTGCAGC AACCGATATT
CATGAGCAAT GGGTGGCTCT GGAAGCATTG CGCGAGTCTG AAGAAAAATT CCGCACGCTG
GCAAACACGG CACCTGCCCT CATCTGGTAT AACGATGCCC AGGGCAAGAA TTGTTTCATC
AATCAATATT TCCTGGACTT TACGGGCAAG AGTGCCGAGC AGATTCGCGG GGAGGGTTGG
CACGATCTGG TTCATCCCGA TGATGCCGAA CATTACATTG TGGATTACTT GGTAGCCGTC
CACGAACAGA GATCCTGGCA CAACCGCAAT CGCATCCGTC GGCATGATGG GGTGTGGCGG
TGGCACGACA ATTATGCCCA ACCGCTCTTC AGTACCAATG GCATTTATCT CGGTCACGTT
GGCGTGACGA TCGATAATAC CGAGGCGATC GAAGCGGGAA TTGCATTGCA GGAGAGTGAG
CAACGCTACC GCCACCTGGT AGAACTCACC CCCCACTTAG TATGGAATGC TGATGAACAG
GGGCATAATA CCTATGTCAG TCCGCAGATG AGCGCCTATC TTGGATTACC CCCTGAGCAA
CTCTTGAATC TTGACTGGGA AACGGTGATT CATCCTGAGG ATGTTGACCG CGTTCATCGC
ACCTGGATGA AAGCAGTACA AACAGGCACT CCCTACGAGG TTGAATATCG GCTGCGCAGA
GTGGATGGAG AATATCGCTG GCATTTGGTT CGTGCCGTCT TCGAGGGCAA CGAACAGGAT
CGGAAGTGGT TTGGGGTGTC TACGGATATT CACGATCGCA AACGCGCCGA AATTGCCCTG
CGGGAATCGG AAGCCAAATA TCGATCGCTG TTTGATTCGA TCGACGAAGG TTTCTGTCTG
CTCGAAATGA TTTATGACGA GGCAGACAAA GCGGTTGATT TCCGCCTTTT AGAAGTCAAT
CAAGTCTTCG AACGGCAAAC CGGACTCCAA AACACTGCTG GCAAGTTGGG CAGCGAGGTT
GTCCCAAACA CAGAATCCCA CTGGCTCAGA GGTTATAGCA ACGTGGCGCA GACGGGTGAG
CCGCTGCGGG TGGAAAACTA CCACGAATAT ACGGGACGGT GGTATTCGGC TTATGGCTCA
CGGGTCGGCG GTGTGGGCAG TCGGCGGGTT GCTATCGTCT TCGACGACAT CACGGAGCGC
AAGCGCGCCG AGGAGGCGTT GCGCGAAAGC AAGGAGCAGC AGGCGTTCCT GCTCAAGTTC
TCCGACGCGC TGCGCGCGGA GCCAGATGCA GACGCCGTGG CGAACCGCGC GATTCGGATG
CTCTCCGAGC AGTTGCGGCT CGACCGCTGC TACATCGGAG TCTACCGGCT CGCGGATGAC
CGTGCCGACT TCACCCATCA GGTAGGAAAC GACCGAGTGC CGCCCCTACC CGACGGAGTT
CGCCTGTCCG ATTTTCCTGA GGCCCTTCGG GTCGCGTTCG ACCGGACTCT GGTGATCGAC
GACGTCGCGG AGACAGAAGG CCTGACCGAC ACAGACAGGC GAAACCTTGG TGCCCTCGGA
CTGCGTGCGC TCGTCGCCGC GACCCTGCGC AAGGGTGAGA ACAACCCGCT CTGGGCGATG
GTTGCGGTCT CGGCATGCCC CCGGCGCTGG ACACGGAGCG AGGTTGCCTT GGCCGAAGAC
GTCACCGAAC GAACCTGGGC GGCAATGGAA CGTGCCCGTG CCGAGGAAGC ATTGCGCGCG
AGCGAGTCAC GTTACCGCTA TTTAGTTGAA GCCGTCCCAC ACCTGGTTTG GACGACGGAT
GCCAAGGGGC GCGTTACCTT TGTCAGTCAA CGGCTGTGTG ATTATATTGG GCTTCAGGCT
AGCCAGCTGA TGAATTTAGA GTGGCGAATG GTGATCTATC CCGAGGATGT AGAGCGCGTT
TATCAATGCT GGATGCACTC TGTACACACT GGTCTGCCCT TCGAAGCCGA GTATCGTATC
CACCGCGCTG ATGGCACCTA TCGTTGGCAG CTGTCAAGAG CCATGCCGTT CCGGAATGAG
CAAGGTGAAG TTGTGCAGTG GTTCGGTCTA ACGCTCGACA TTCACGATAA ACAAGAACTA
GAACGGCAGC GGGACCAAGT CCTGCAACAA GCCCAAGTGG CTCAGGAGGA AGCCGAACGG
GCCAACCGCA TTAAAGATGA GTTTCTCTCC ATCCTCTCTC ACGAACTGCG CTCTCCGCTC
AACCCCATCT TGGGCTGGGC CCAGCTGCTT CAAATTAAGA CGTTGGATCA GACCACAACC
AAGCAGGCGC TGGCCACGAT TGAGCACAAT GCCAAATTAC AGACCCAGCT GGTGGACGAC
CTGCTGGATG TCGCCCGCAT TCTGCGTGGA AAGCTTAGCC TGCAGGAAGC TCCCGTTAAT
CTGGTCTCTG TTATTGCTGC CGCACTGGAA GTGGTTAAAA CTGCAGCTGA CGTAAAATCT
GTCACCCTAC AGCCTGAATT AACGGACATC GGCCAGGTGA GAGGGGATGA GGCCCGGCTT
CAGCAAATCG TCTGGAACTT GCTGTCCAAT GCCATCAAAT TCACCCCCAC GGGTGGACGG
GTGACGATTC GGCTAGAGCA GGTCGAGGAT CAGGCACAGA TTACCGTTAC CGATACGGGT
ATCGGCATCC AGCCTCAGTT TCTACCCCAC ATCTTTGAGT CGTTCCGCCA GCAGGATACC
TCGATTTCGC GACAGTATGG GGGACTCGGT TTGGGGCTCT CGATCGTCAA GTATTTAGTG
GAGGCCCATG GTGGCACGAT CACGGCTGAA AGCCCAGGGG AGAATCAAGG GGCAACCTTT
ACGGTCCAGC TGCCCTTGCT CAAGGCTGCA TCACCTTCCC CGGCAGGTGA GCCACGTCTA
CCCGGAGACA TTGACTTAGC TGGGCTAAAA GTTTTGTCTG TGGATGACCG GGAGGATGCT
CGGGAGCTGT TCGCTACGGT GCTCAGCCTT TATGGGGCAG AGGCGAGGGT GGCGGCCTCT
GGGATGGAAG CGTTGGATCT CCTCACCACC TTTAAGCCGG ATGTACTCAT CTGTGACATT
GGCATGCCCG GTATGGATGG CTACACCCTG CTGCAACGCA TTCGGGCCTT ACCCATTGAA
CAGGGTGGAA CCGTTCCAGC GATCGCCGTT ACCGCTCATG CCCGAGAGGA AGATCAGCAA
CGGGCATTAG AAAGTGGCTT TCAAGGACAC ATCGCTAAAC CGATTGAACC AAAACGCTTG
GCGATCGCGG TGGCAGAGCT GGCGAGAACG TCATGA
|
|---|
| Protein sequence | MASPDRTILV IDVLPGSAAP YQCLLQPAAE GLYRVITESY NGPILALCRS ARVDAILLES
RFPDPQGLDV LDQLKAQLGE QCPPIIVIDQ NDANLAKRAL KAGAVDYLIR SQITSEILYQ
AVSMVISTDG KSHDAERPKT EAALRESEAR LQAVTNLVPD LLWDSEPDGS TNWYNQRWME
YTGQTFEQAI GWGWIDAIHP DDREGSARRY REAVEQGVPL QQEHRIRRHD GAYRWFGVKA
SPLKDGSGKV VKMYGAATDI HEQWVALEAL RESEEKFRTL ANTAPALIWY NDAQGKNCFI
NQYFLDFTGK SAEQIRGEGW HDLVHPDDAE HYIVDYLVAV HEQRSWHNRN RIRRHDGVWR
WHDNYAQPLF STNGIYLGHV GVTIDNTEAI EAGIALQESE QRYRHLVELT PHLVWNADEQ
GHNTYVSPQM SAYLGLPPEQ LLNLDWETVI HPEDVDRVHR TWMKAVQTGT PYEVEYRLRR
VDGEYRWHLV RAVFEGNEQD RKWFGVSTDI HDRKRAEIAL RESEAKYRSL FDSIDEGFCL
LEMIYDEADK AVDFRLLEVN QVFERQTGLQ NTAGKLGSEV VPNTESHWLR GYSNVAQTGE
PLRVENYHEY TGRWYSAYGS RVGGVGSRRV AIVFDDITER KRAEEALRES KEQQAFLLKF
SDALRAEPDA DAVANRAIRM LSEQLRLDRC YIGVYRLADD RADFTHQVGN DRVPPLPDGV
RLSDFPEALR VAFDRTLVID DVAETEGLTD TDRRNLGALG LRALVAATLR KGENNPLWAM
VAVSACPRRW TRSEVALAED VTERTWAAME RARAEEALRA SESRYRYLVE AVPHLVWTTD
AKGRVTFVSQ RLCDYIGLQA SQLMNLEWRM VIYPEDVERV YQCWMHSVHT GLPFEAEYRI
HRADGTYRWQ LSRAMPFRNE QGEVVQWFGL TLDIHDKQEL ERQRDQVLQQ AQVAQEEAER
ANRIKDEFLS ILSHELRSPL NPILGWAQLL QIKTLDQTTT KQALATIEHN AKLQTQLVDD
LLDVARILRG KLSLQEAPVN LVSVIAAALE VVKTAADVKS VTLQPELTDI GQVRGDEARL
QQIVWNLLSN AIKFTPTGGR VTIRLEQVED QAQITVTDTG IGIQPQFLPH IFESFRQQDT
SISRQYGGLG LGLSIVKYLV EAHGGTITAE SPGENQGATF TVQLPLLKAA SPSPAGEPRL
PGDIDLAGLK VLSVDDREDA RELFATVLSL YGAEARVAAS GMEALDLLTT FKPDVLICDI
GMPGMDGYTL LQRIRALPIE QGGTVPAIAV TAHAREEDQQ RALESGFQGH IAKPIEPKRL
AIAVAELART S
|
|---|
| |