| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4048 |
|---|
| Symbol | |
|---|
| ID | 7289996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4078880 |
|---|
| End bp | 4079386 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643587020 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_002484723 |
|---|
| Protein GI | 220909412 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.606719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0467055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACG CCCAAAACCA TATCTGGAAA TTGCTCTGGG AGTATGATCC CAGTGGGGTG
GTGGTGGTGG ATGCCGATCT GTATATCAAG ATGGTGAACC CGTCTCTGTG CAGGATGTTT
GGGGTTAACC CAGAGGACGT GATCGGTCAA CCTGCCGTGG TTATTTTTGA TGATGTGACT
GATTTACGTC GGGTGTGGCA GCAGGATATT GTGATTCGCG GCCAGCTCAA AGAATATGTC
CAGCCTCAGC TCTATGTTAA CGAGGTAATT TTTGCGATCG CCGATGCCGG GGTGATTGTC
TGCATCATGG TGGATATGAG CCATGAATTA GAGCGTAAAC GGCAACTGGA AAAATTGAAA
TATGAAACCG TCCAGAAAGT GAACGAGGTG GTGGATAAAC AAATGAAAGT TGTGCAGGAA
ATTGCCGGTC TGTTGGGAGA AACCACAGCG GAAACCAAAG TCAGCCTGTT AAAAATTATT
CAGATGCTCG GACAAAACAC CGTCTAG
|
|---|
| Protein sequence | MEDAQNHIWK LLWEYDPSGV VVVDADLYIK MVNPSLCRMF GVNPEDVIGQ PAVVIFDDVT
DLRRVWQQDI VIRGQLKEYV QPQLYVNEVI FAIADAGVIV CIMVDMSHEL ERKRQLEKLK
YETVQKVNEV VDKQMKVVQE IAGLLGETTA ETKVSLLKII QMLGQNTV
|
|---|
| |