| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3989 |
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| Symbol | |
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| ID | 7289936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 4020293 |
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| End bp | 4022887 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643586960 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002484664 |
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| Protein GI | 220909353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000845888 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACCTG CCGATCACCC TCTGTCTCAC TCCTCCCCTG CCCCACTGGC CGATCGGGGT
GCCCTCCAGG AGGGACGGTT ACTGGGGCTG CTGGTTGCGG CTTGCTACAG TTTGTTTACC
CTCCTGCCAG ACAGCAATAG TCTGATGGTG AGCTGGCCCT GGGTTCTGGT CTGGCAGATC
AGTCTGGCCT GCCCAATTCT CTGGTTGCTC TGGCAATTAT GGTATCAACG GCGACTGCAG
GGCCTGGGCC ATGGGCTGGA TCTGGTGACT CTGCTCGGTC TGGTTGGCCT GCTAGTTTCT
TCCATGACCG CAGAATTTCT CAATCAGGCT CGCTGGTACA GTTGGGCAGC GCTGGGTTTT
GTGGCGGCCC TTTATGCGCT CAAGGCCTGG CTGAGAACGC CAACCCGACG ATTAGGGGTG
CTGACCTTTC AGGGATATTT GAGTCTGACC TTTATCGGTG TGAGCTTGCT GCTCTGGAGT
GCGCAAACCT TCTGGCCAGA AATGGTGCGT CTGGAGCGGT TACGGCAGTT GGGGTTGAAT
CGGAGCTACG ATTTTTCCGT TCTGGAACTG CGAAATTGGG CCCCCCTCGG TCACCAGAAC
TACGTTGCCG GTTATTTACT GCTGGCCCTG CCGTTACTGG GAGCACTGGC CATCCTTCAA
CCCGGAAAAC GGCGCTGGCT GTGGTTGGGC GGCATTGGCC TGGGGCTACT GGACCTCTAC
ACAACCAACT CCCGAGGTGG GGGGCTGGGA TTGCTGGTGT TGGCGATCGC CGCTTTGCTG
TTCTGGCTAT TGTTCCGTTC TTCTTCCCGC TGGTGGGTGG TGCTGGCAGC CCTTCCCCTG
CTGGGTGGAT TCATCTTACT GAACAATCGT TTGCTGGCCT CCCTACAATC TCTGCTCGCT
GGACGCACTG ACTTTGGTGA GTTGTCCTAC CGCTTGATCA CAAACACCAT TGGCTGGGAG
ATGGGGAAAG CTCACCTCTG GACGGGTGCG GGGCTGGGAG CTGTACCCCT GATGTTTCAA
CGCTATCGTC CCGGTTGGGC TGGACGGGAA GCTGAATTAG CCTATCAATT ACACAGTACA
CCGGCACAGC TCTGGGCAGA GTTGGGGGTG TGGGGAATTC TTGCCCCGCT GGTGCTGTTC
CTCCTGCTGG CCTACCTGGG GGTTCGCTGG CTCAGGACTC TGGATCAAAA GGCCGCTGCC
ATCACCCCCA GCGATCGGGT GTTTACCCCT GCGATCTATA CGGCTTTACT GGCCTATGCC
GTTTTCAGCC TGACGGATTT TCAACTGGAT AACATTGCGA TCAGCGGCTT GCTGGTGGTT
TACCTGGCTT TTCTGGCGGC CCATTTCAGT GAAACTCTGG TCAAACCGGA GCAGGGCCAA
CGCCATCTCT GGGTGCATAT TCTCGGCTGG GGTGGATTGG GCTTTCTGGT TGCTGCTGGG
CTCTGGCTGG CTCCCATCCA CCAGGCCTGG AATTTGTCTG CTCAGGGGTT TACGGCTCTT
GCTCCCGGCC GCCCGGATCG CCCCCCGGAT TTTGACCTGT TTACCCGACG GTTGAGTGCA
GCTCGGGATC TGGCTCCCTG GCAACCTTAC TATCCCTACC AGATGGGGTG GAATCTAGCC
AGCCAGTGGG GAACAACAAC GGAGCCTGAG CAACGTAAAA TTTTCTTGGA CAATGCCATT
TTTCGGTTTG AACAGGGCAA TAGCGTTTCC CCCTACCAGG AGTTTGGGCA AAGCAATCTG
GGCTGGTTAC TCCTGGCCAA AAATCCCCAG ACCGCTGCCC GTTCCTTTAG CCATGCTGCC
CAGTTGATGC CTGCTAAACG GGGAGTATTT TACGGCCTGG GGTTGAGTTT ACTGGCTCAA
GGTAAAACGG AGTTGGCGAT CGCTGCCCTC AGTCTGGAAG TGTTGCGTGA TCCGCTGTTT
ATCACCAGTC CCCTCTGGAA CTCCAGCCTG CTCAGGCCCC TCTATCAGCC GGTGCTGAAA
AAAGTGGGCG ATCGCTATCA AACCCTGCTG CAGCAAAATG CTCAACCAGA TCTGCTCAAC
CCTCTCCTGC ATCAAACTTG GGGATCGATC CTCTGGTGGC AGGGGGATCT GACCGGGGCG
AAAAGAGAAT GGGCAATTGC CACCACTCCC CTGAATCAGG CCATTCTCCA ACTGGCAGAA
ACCGGAAGCG TAAAGCCGGA ATCGTTGCAA AACCAGGTAA CGGCTCCCTT CCTGCTGGTC
CAAGCCTGGC TGAATCCCTC CCAGCGGCAG CAGTTTTTGG AACGGGCCTG GTTAAACGCC
ACTGAAACGC CCCTTCCCCC TGAGATCCGC CAGCAATTGC TCAACGGCAT GGCTCAAGCC
ACCAGTTTTG ACCAGTGGGT GAAGCAGTAT GCCCCAGTGC GGGAATCGCG CCGTAAACGA
GCTGGCTTCG GGGTGCTCAG CCGTCATATT GATGGTCCTG CCCCTGAAGA TTTTCAGGTT
GTTGTTGAAA ATGTCATTGT CAGTACCTGG CTGGCGGATT TGTTTCCTTC CCCCTTCTAT
CAGCCGTCTC TGGATCGGGC TCTGCAACCC TGGCGCGACG AACTGGTGAC CAGCGTGGCT
ATGCTGAAGA AGTAG
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| Protein sequence | MEPADHPLSH SSPAPLADRG ALQEGRLLGL LVAACYSLFT LLPDSNSLMV SWPWVLVWQI
SLACPILWLL WQLWYQRRLQ GLGHGLDLVT LLGLVGLLVS SMTAEFLNQA RWYSWAALGF
VAALYALKAW LRTPTRRLGV LTFQGYLSLT FIGVSLLLWS AQTFWPEMVR LERLRQLGLN
RSYDFSVLEL RNWAPLGHQN YVAGYLLLAL PLLGALAILQ PGKRRWLWLG GIGLGLLDLY
TTNSRGGGLG LLVLAIAALL FWLLFRSSSR WWVVLAALPL LGGFILLNNR LLASLQSLLA
GRTDFGELSY RLITNTIGWE MGKAHLWTGA GLGAVPLMFQ RYRPGWAGRE AELAYQLHST
PAQLWAELGV WGILAPLVLF LLLAYLGVRW LRTLDQKAAA ITPSDRVFTP AIYTALLAYA
VFSLTDFQLD NIAISGLLVV YLAFLAAHFS ETLVKPEQGQ RHLWVHILGW GGLGFLVAAG
LWLAPIHQAW NLSAQGFTAL APGRPDRPPD FDLFTRRLSA ARDLAPWQPY YPYQMGWNLA
SQWGTTTEPE QRKIFLDNAI FRFEQGNSVS PYQEFGQSNL GWLLLAKNPQ TAARSFSHAA
QLMPAKRGVF YGLGLSLLAQ GKTELAIAAL SLEVLRDPLF ITSPLWNSSL LRPLYQPVLK
KVGDRYQTLL QQNAQPDLLN PLLHQTWGSI LWWQGDLTGA KREWAIATTP LNQAILQLAE
TGSVKPESLQ NQVTAPFLLV QAWLNPSQRQ QFLERAWLNA TETPLPPEIR QQLLNGMAQA
TSFDQWVKQY APVRESRRKR AGFGVLSRHI DGPAPEDFQV VVENVIVSTW LADLFPSPFY
QPSLDRALQP WRDELVTSVA MLKK
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