| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3585 |
|---|
| Symbol | |
|---|
| ID | 7289527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 3549417 |
|---|
| End bp | 3550937 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643586559 |
|---|
| Product | high-affinity nickel-transporter |
|---|
| Protein accession | YP_002484267 |
|---|
| Protein GI | 220908956 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.83596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.321001 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGA GGTTTTTCAG ATGGCGGGGC AGAGGAGGAA AAATTGTATT GCTATTGCTC
TCCTGTTTAA CCCTTGGGTT ATCCCTGCTG ACAGCACCCC CAAGCCGGGC CCACTGGTCA
GATTTATCCG TAGCAGAAAT AGTGGTGAAC CCAACCGCCA CCCAGATGAC GCTGACCGTA
CCGACAGGAT TGCTCAACTT TGCCGACACC GATCGCAATG GCCAATTATC AGTCCCAGAA
ATTAACAGCC ATATGCCACA GTTGCAAGCC TTCCTGGCTG ACAAGATCCA CTTGTATAAC
GGTAATGGTC AGTTGGGCTT TCTCCAAATT ACGCCCCTGC CTGCTGTGCC CAAGCTGCGT
GCGCCCAGGA TCGAAGCACC CAATACCCAC ACCACTCTTT TACTGGACTA CAGTTGGTCT
CAACCAGTGC GCGGATTGCA GATTGATTAC AACTTGTTTT TAGCCGGAGT TCCAACTGCC
CATTGTTTGG CCACCATTCT TGCCCCGGAA GGATCTCGCA CGTTTATTTT TACGCCCCAA
AACCGCCATT TTGCCTTATT GCCTCGGATG GGATGGTTAC AAGCTGGAGA AGGATTACTG
GCGATCGTTG CAGCCTTCAG TTGGGGAGCC ATGCATGCAC TTTCCCCCGG TCACGGTAAA
ACCTTAGTGG CAGCTTATCT GGTGGGAACA CGGGCAACGG CTGGTCACGC CCTCTTGCTT
GGTTTAACTA CAACGATTAC CCATACCCTG GGGGTGTTTG CTCTGGGTTT AGTGACGTTG
TTTGCCACTC AGTATATCCT TCCAGAACAA ATTTACTCCT GGCTCAATGC AGTTGCTGGG
GTCATGGTGA TGGTGATTGG AGTCAACTTA TTAATTAGCC GCTGGTGCAA CGCTCGAATC
AGTAAACGGC AGGGGGGTGG ACATGAACAC CATAGCCATC AACACCATAG CCATCTCTAT
GAGCATTCTG GGCATGGGCA CAGCCACCAT GAACACCATA GCCCTGCAGA CGGTTTTCAT
CCTGGACATG GGCATCAGCA TTCAGAACAC GACAGCCAAG TCAACGATCG CCATCCACAT
CATGACCATG AACACGATGG CCATCGACCC TCCGATCGGC ACAGCCACTC CCATTTACCT
GGGGCAGATA CGCCGGTGAC CTGGAAAAGT TTGCTGGCAC TGGGGATTTC TGGTGGCTTG
CTACCCTGTC CGGCCGCCCT GGTCCTCTTA CTGGGAACGA TCGCCCTGGG AAGGATCAAT
TTTGCCCTTT TACTGGTGCT GGCCTTCAGT TTGGGTTTAG CGGGTGTATT GACGGGATTG
GGATTACTCC TGGTTTTTGC CAAAGGCATC TTTCGGCACT TGCCCACGCC CAAACTGCGT
TTAATACGGT TTTTACCGGC CCTTAGTGCC CTTGGGATCG TTCTGGTGGG AACTGGGATT
ACAATTCAAG CACTGCTCCA GTTGCAAGGA AACTTAAGCA CGATCTCCGC TGCACTATTA
CAAATTCCCA ATCCACCATA A
|
|---|
| Protein sequence | MRLRFFRWRG RGGKIVLLLL SCLTLGLSLL TAPPSRAHWS DLSVAEIVVN PTATQMTLTV
PTGLLNFADT DRNGQLSVPE INSHMPQLQA FLADKIHLYN GNGQLGFLQI TPLPAVPKLR
APRIEAPNTH TTLLLDYSWS QPVRGLQIDY NLFLAGVPTA HCLATILAPE GSRTFIFTPQ
NRHFALLPRM GWLQAGEGLL AIVAAFSWGA MHALSPGHGK TLVAAYLVGT RATAGHALLL
GLTTTITHTL GVFALGLVTL FATQYILPEQ IYSWLNAVAG VMVMVIGVNL LISRWCNARI
SKRQGGGHEH HSHQHHSHLY EHSGHGHSHH EHHSPADGFH PGHGHQHSEH DSQVNDRHPH
HDHEHDGHRP SDRHSHSHLP GADTPVTWKS LLALGISGGL LPCPAALVLL LGTIALGRIN
FALLLVLAFS LGLAGVLTGL GLLLVFAKGI FRHLPTPKLR LIRFLPALSA LGIVLVGTGI
TIQALLQLQG NLSTISAALL QIPNPP
|
|---|
| |