| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3369 |
|---|
| Symbol | |
|---|
| ID | 7289306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 3326373 |
|---|
| End bp | 3327068 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643586341 |
|---|
| Product | Triose-phosphate isomerase |
|---|
| Protein accession | YP_002484054 |
|---|
| Protein GI | 220908743 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0061573 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAA CCCAGGCAGA GTCCCTGGAG TTCTTACAGG AGTTTTTGCC CCATCTAGAG
CAAACTCCAG AGGGACGGGA GGTCATCCTC TGTGTACCCT TTACAGATCT TGCTATTCTC
TCTCAGAACC TGCATGGCAG CCGGGTACAG TTGGGAGCAC AAAATATTCA TTGGGAAAAG
TCTGGAGCCT TCACCGGGGA AATTTCTGGC CCCATGCTGA TGGAGGTGGG CGTTCGTTAC
GTCATTGTCG GTCATAGTGA GCGACGACAG TACTTTGGCG AGACGGATGC CACGGTGAAT
CTGCGCTTAA GGGCAGCCCA GGCGATCGGT CTAACCCCCA TTCTCTGTGT GGGTGAAAGC
AAACAACAGC GGGATGCGGG TGAAACGGAA TCCCATATTT TTAACCAGCT CGAGCATGAC
CTGAAAGGGG TGGATCAGAC CAATCTGGTG ATTGCCTATG AACCCATCTG GGCGATCGGC
ACGGGAGACA CCTGTGAAAC CTTAGAAGCC AACCGGGTGA TTGGATTGAT CCGTAGCCGT
CTGGACCACA AAGACACACC GATTCAGTAC GGGGGGTCCG TCAATCCCGA AAATATTGAT
CAGATTATGG CCCAGCCAGA AATTGATGGC GCACTGGTGG GGGGAGCAAG CTTAAAAGGC
AGTGGCTTTG CCCGCATCGT CAATTACCAG ACCTGA
|
|---|
| Protein sequence | MHKTQAESLE FLQEFLPHLE QTPEGREVIL CVPFTDLAIL SQNLHGSRVQ LGAQNIHWEK
SGAFTGEISG PMLMEVGVRY VIVGHSERRQ YFGETDATVN LRLRAAQAIG LTPILCVGES
KQQRDAGETE SHIFNQLEHD LKGVDQTNLV IAYEPIWAIG TGDTCETLEA NRVIGLIRSR
LDHKDTPIQY GGSVNPENID QIMAQPEIDG ALVGGASLKG SGFARIVNYQ T
|
|---|
| |