Gene Cyan7425_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3320 
Symbol 
ID7289256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3281765 
End bp3282307 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content46% 
IMG OID643586293 
ProductTPR repeat-containing protein 
Protein accessionYP_002484006 
Protein GI220908695 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTA ACTTACTAAC GATTTATCTG GTGATCCTGC TGGCTATCCT GGGAGGAGCT 
TCCTGGTTTA TTTTGCGACA AATTCTAAAA ACTCGACGGA TGGAAAGCAG CCTGTCTCGC
TTGCAAAATA AATTAAACAG GGAACCGGGC ACCACCCAGG AGTATTTTGA GCTTGGTGGC
ATTTATTTAA GCAAAAATTT ATCAGTACAG GCGATCGCTC AGTTTCAGAA AGCCCTGAAA
GCGGCAGAGG CGGAGGGTGA GGAAAATATT TCCCCCATTT ACAATGCGAT CGGTTATGGT
TATTTCCTCC AGGAACAGTA CGATCTGGCG ATTCGCAATT ATAAAGAAGC GCTGAAAATT
AATCCACAGT ACCCCACGGC GCTGAACAAT CTGGGTCACG CTTACGAGAA AAAGAACCTG
AATAGCGCGG CTTTAGAAGC CTACGAGCAG GTTTGCAACC TGGAGCCTAA AAATGCGATC
GCCAAACAAC GGGCTGAAAC TCTGAAGCGC AGATTGGTTA CGACCAAATC GTCCAAGGAC
TGA
 
Protein sequence
MESNLLTIYL VILLAILGGA SWFILRQILK TRRMESSLSR LQNKLNREPG TTQEYFELGG 
IYLSKNLSVQ AIAQFQKALK AAEAEGEENI SPIYNAIGYG YFLQEQYDLA IRNYKEALKI
NPQYPTALNN LGHAYEKKNL NSAALEAYEQ VCNLEPKNAI AKQRAETLKR RLVTTKSSKD