Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3320 |
Symbol | |
ID | 7289256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 3281765 |
End bp | 3282307 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643586293 |
Product | TPR repeat-containing protein |
Protein accession | YP_002484006 |
Protein GI | 220908695 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAGTA ACTTACTAAC GATTTATCTG GTGATCCTGC TGGCTATCCT GGGAGGAGCT TCCTGGTTTA TTTTGCGACA AATTCTAAAA ACTCGACGGA TGGAAAGCAG CCTGTCTCGC TTGCAAAATA AATTAAACAG GGAACCGGGC ACCACCCAGG AGTATTTTGA GCTTGGTGGC ATTTATTTAA GCAAAAATTT ATCAGTACAG GCGATCGCTC AGTTTCAGAA AGCCCTGAAA GCGGCAGAGG CGGAGGGTGA GGAAAATATT TCCCCCATTT ACAATGCGAT CGGTTATGGT TATTTCCTCC AGGAACAGTA CGATCTGGCG ATTCGCAATT ATAAAGAAGC GCTGAAAATT AATCCACAGT ACCCCACGGC GCTGAACAAT CTGGGTCACG CTTACGAGAA AAAGAACCTG AATAGCGCGG CTTTAGAAGC CTACGAGCAG GTTTGCAACC TGGAGCCTAA AAATGCGATC GCCAAACAAC GGGCTGAAAC TCTGAAGCGC AGATTGGTTA CGACCAAATC GTCCAAGGAC TGA
|
Protein sequence | MESNLLTIYL VILLAILGGA SWFILRQILK TRRMESSLSR LQNKLNREPG TTQEYFELGG IYLSKNLSVQ AIAQFQKALK AAEAEGEENI SPIYNAIGYG YFLQEQYDLA IRNYKEALKI NPQYPTALNN LGHAYEKKNL NSAALEAYEQ VCNLEPKNAI AKQRAETLKR RLVTTKSSKD
|
| |