Gene Cyan7425_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_2506 
Symbol 
ID7288437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp2465780 
End bp2466274 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content56% 
IMG OID643585501 
ProductOstA family protein 
Protein accessionYP_002483224 
Protein GI220907913 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.979072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.875661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACTGC GTTTAATCTG GTTGCCGGTA ACCCTGGGCG GAATGCTTGG CATGGACCTG 
GCTCTCCCCC TCCCTTTTCC GCAGCAGGGT TGGACAGAAC TGATCCGACC GGGGGCGATC
GCGTCCCTCC CCTTTTCCTC CCCCATAGCC CGGGCAGAAG CCCCTCAGCA AGCGCTCACC
CTGAAAGCAG ATATCCAGCA GGCCAATGCC AATACTGGTG TTGTGACTGC ACGGGGGAAT
GTACAATTAA TTTACCCAGC TCGGCAAATT CAGGCTACTG CCTTTCAGGC CCAGTACTTC
AGTCGCGAAC GACGCATTGT CCTCAGCGGT AATGTGTATG TGCTGCAACA GGGGAATAGT
TTGCGGGCGG AAACGGTCAC CTATTTGATT GATGAAGGGC GTTTTGTCGC TCTACCCACT
CCCAATCGTC AGGTGGAGTC TGTCATTCAG CTGCGTGACA ATCCCGCTCT TAACCCGAAT
CTAGGTGCCC CCTGA
 
Protein sequence
MVLRLIWLPV TLGGMLGMDL ALPLPFPQQG WTELIRPGAI ASLPFSSPIA RAEAPQQALT 
LKADIQQANA NTGVVTARGN VQLIYPARQI QATAFQAQYF SRERRIVLSG NVYVLQQGNS
LRAETVTYLI DEGRFVALPT PNRQVESVIQ LRDNPALNPN LGAP