| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_2450 |
|---|
| Symbol | |
|---|
| ID | 7288380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 2400918 |
|---|
| End bp | 2402309 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643585445 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_002483169 |
|---|
| Protein GI | 220907858 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.380494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000112727 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTG AAGTACCTTT TACTTTTAGC ACGTGGGATT TATCTAAACC CCTTACCCCA
GCTCGTAGTT CTCTCTTTAG CTTGAAACCG ATTGGGGTTG GAACGGCTGC AGTAGAAAGC
CTCACTGGAT ATATTGCACG TTTGGCTGAA GCTCACTGTA TCTGGCCAGG AGATCTTCTT
GCAGCTGAAT TTAGTTCTTC ATATTCCTAT TCTTACCTGC ATAGCATGAG GGGCCGTATT
GCTGCTTTGA ATGGTAATAG CCAAATGGCT CAGGATGCTG TACTTAAGCT TCAAGAGCTT
ACCTTACAGG AGAATTTATC CGCTTTAACA ATGTTAGGCT GGGCTAATAT TTTACCCGCA
AAAGGGTTGT TAAATCGGAC TCGAACTTGG TGTCCGGTTT GTTTTGAGGC GTGGCGTTTC
ATCAAAAGTC CTATATATGA GCCTCTATTA TGGTATTTAA CCTCGGTCAA ATATTGTCCA
ATTCATCAGC AACGCCTTTT ATCTCAATGT CCATTCTGCG GGTGCCAGCA GCCTCCTCTA
GACTGGAAAA CTCGGCCGGG CTATTGTTCA AGGTGCCAGG TGTGGCTGGG TTCACCACCA
GGTGTAACTT CCAGTAATTC GCTTTCTAAT ACAGAAATAA GGTGGGAGAG TTGGGTTGCC
CAGAGCTGCG GAAATTTGTT AGCCTATAGT CCTCGTTTAC ACAAGATATC CGTTAGCGTT
CAGGTCGCAG CATCCCTTTC TAAATGTATC AACCTTTATG CAGAGGGCAA TATTGCGGAG
TTTGCCCGTC AAATGAGCTT GCCAAAAACT TCTGTTTGGC TGTGGCAGTC TGGTCAGGTA
CTCCCCGAGT TATCCAGGCT TTTAAGCATC TGCTATCACT TCAATCTGTC GCTCTTAGAC
TTTCTAATTA ATACACCAGT TCTTAAGATA AGGAGAGACT TAATTCCAGA AAAGAGAACT
AATGAGTTTC GCCAGCCTCG AAGAGATCCC TCAACCATAT CTCAATTGCA ACCTATTCTG
GGATTAATTC TTTTCGAGCA GCCACCTCCC TCTTTAGCAG CAGTAGCGTG TCGCTTAGGT
TGTAGCTCAA GATCCCTGCG CCATAATTTT CCTGATCTCT GTGGCTCTAT TTCTGCACGT
TACCTTCAAC ACCGTGATGA AGTTTATAAA GAAAAATTGA ATCAATTCTG TCAAGACTTG
CGCCAAGTTG TACTTCAACT TTATTCGGCA GGCATTGATC CGACTCGGAG CCAAGTTGCT
CGCCGTCTGA GGAAACCCGC TTATTTTAGA GAACCCGAAG TCGAGGCAAT GCTTGAGTCT
GTTCGACGAG AATTAGGCTT GCACAGCAAT TCTCAGCATG AGACTAATTC TCACAAAAAC
GCCCAGTTTT AA
|
|---|
| Protein sequence | MATEVPFTFS TWDLSKPLTP ARSSLFSLKP IGVGTAAVES LTGYIARLAE AHCIWPGDLL
AAEFSSSYSY SYLHSMRGRI AALNGNSQMA QDAVLKLQEL TLQENLSALT MLGWANILPA
KGLLNRTRTW CPVCFEAWRF IKSPIYEPLL WYLTSVKYCP IHQQRLLSQC PFCGCQQPPL
DWKTRPGYCS RCQVWLGSPP GVTSSNSLSN TEIRWESWVA QSCGNLLAYS PRLHKISVSV
QVAASLSKCI NLYAEGNIAE FARQMSLPKT SVWLWQSGQV LPELSRLLSI CYHFNLSLLD
FLINTPVLKI RRDLIPEKRT NEFRQPRRDP STISQLQPIL GLILFEQPPP SLAAVACRLG
CSSRSLRHNF PDLCGSISAR YLQHRDEVYK EKLNQFCQDL RQVVLQLYSA GIDPTRSQVA
RRLRKPAYFR EPEVEAMLES VRRELGLHSN SQHETNSHKN AQF
|
|---|
| |