| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_2167 |
|---|
| Symbol | |
|---|
| ID | 7288094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 2074002 |
|---|
| End bp | 2075639 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643585162 |
|---|
| Product | GMC oxidoreductase |
|---|
| Protein accession | YP_002482889 |
|---|
| Protein GI | 220907578 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAATTG ACGCGCGATC GCTACCGGCA GATGAGGAAT TAAAAACGCA GGTATGTATT
GTTGGCGCTG GACCCGCTGG TATCACATTG GCCCGTGAGT TTGCTGATCA AGATTTTCAA
GTCTGTCTAC TGGAAAGCGG CGGCCTTAAC TTTGACCCCG AAATCCAAGC ACTTGCAGAT
GGAATTGTGA TGGGTGATCC GTACCCTAAA GTCAGTGACA CCCGTATGCG TCAGTTTGGT
GGAACCTCTC ATCTGTGGGA AGGTCAAGTG GGTTACAAGG AATATGGCTT TCGTTGCCTT
CCCCTTGATC AAATTGATTT TGAACAGCGG GAATGGCTAC CATACAGCGG TTGGCCGTTT
AGCAAGGCGC ATTTAGATCC CTACTATGCC AGAGCCCATG AGGTCTGCCA GTTGGGTCCC
TATGCTTACA ATGTTGACGT CTGGGAAAAT GAATGGGGGA GCCGACTGCC ATTTAAGAGC
GATCGCATCA CAACCTCGAT GAGCCAATAT GCGCCCAGGT ATCCGTTTAC TGAGGGTTAT
CGTGAACAAA TCAAGCGGTG CCCAAATATC ACAACAATCC TTTATGCCAA TGTCGTTGAG
ATCCTGACGG ATGAAACCAG ACAAACCGTT ACTCGATTAC GTATTGCCTC AGCCCCAAAT
CGCCATTTCT GGTTAACGGC TAAACTATTT ATTTTGGCAA CGGGAGGACT AGAAAATGCG
CGCTTACTCC TGGCTTCCCA TCAGCAACAA ACAGCAGGTT TGGGCAATGA GCATGATCTG
GTCGGGCGTT TTTTTATGGA TCGTCCCATT CTAAGCTGTC ATTTGCTTCC CTATCGTCGA
ACATTATTTG ATCAGACATC TCTGTACGAT ATTTATCGGC ATCAGGGAGT TGCGACGATG
GCCTGGCTAC ATCTCTCAGA AGCGGTAATG CGCCGTGAAA AGTTAATGAA CAATGGGGCC
CAACTCTTTC CCAGACCCTT ACCCCGTCAA CGCCAGGCTA CTCTTGCTCT ACGGTCTCTA
ATTCGCTCGA TAAAAAATGG CAAGCCTTTA GAGGATAAGT TCAAATATCT GAGGGAGGTG
CTGCGGGGGA GCGATTACGC GTTTGCAGCA GGGTTCTGGA CGGTTTTAAG ACAGTTGCCG
GGATTGCGGC GGGGAGATTG GTCTTACCTG CCCTACGAAA AACAGCGGTT CTCAGAATTT
GAAATTTTCT ACCAAATTGA GCAGGCTCCT GATCCCAGTA ATCGAGTCAC GTTAAGTTCA
GAGCGAGATC GCTATGGTCA GCCGAAAACT GAGATCTACT GGCGCTTGAA CCCGATCGAT
ATTGAACATG CCACTCGGGT ACAGCAGATC TGGGCAGAGG AGTTTGAACG AGCTGGTCTG
GGAAAATTGC AGTTTGCCCA CAAGCGGGAG GATTGGCAAC TGGAAAAAAT AGCAATGCAC
CACCACATGG GGACCACCCG GATGCACCAT GATCCCAGGC AGGGGGTTGT TGATGCCAAT
GCTAAGATGC ATGGAATTAC CAATTTATTT GTAGCAGGAA GTTCTGTTTT TCCGACTTCA
GGCTATGCTA ATCCGACCCT AACGATTATT GCTTTAGCCA TTCGATTGGC AGATCAGATC
AAAGCATTAA TGAAGTAA
|
|---|
| Protein sequence | MIIDARSLPA DEELKTQVCI VGAGPAGITL AREFADQDFQ VCLLESGGLN FDPEIQALAD
GIVMGDPYPK VSDTRMRQFG GTSHLWEGQV GYKEYGFRCL PLDQIDFEQR EWLPYSGWPF
SKAHLDPYYA RAHEVCQLGP YAYNVDVWEN EWGSRLPFKS DRITTSMSQY APRYPFTEGY
REQIKRCPNI TTILYANVVE ILTDETRQTV TRLRIASAPN RHFWLTAKLF ILATGGLENA
RLLLASHQQQ TAGLGNEHDL VGRFFMDRPI LSCHLLPYRR TLFDQTSLYD IYRHQGVATM
AWLHLSEAVM RREKLMNNGA QLFPRPLPRQ RQATLALRSL IRSIKNGKPL EDKFKYLREV
LRGSDYAFAA GFWTVLRQLP GLRRGDWSYL PYEKQRFSEF EIFYQIEQAP DPSNRVTLSS
ERDRYGQPKT EIYWRLNPID IEHATRVQQI WAEEFERAGL GKLQFAHKRE DWQLEKIAMH
HHMGTTRMHH DPRQGVVDAN AKMHGITNLF VAGSSVFPTS GYANPTLTII ALAIRLADQI
KALMK
|
|---|
| |