| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_2131 |
|---|
| Symbol | |
|---|
| ID | 7288058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 2026387 |
|---|
| End bp | 2028828 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643585126 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_002482853 |
|---|
| Protein GI | 220907542 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.651568 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAAAT GGGTTGTTTT CAAGTTTGGC GAGGGTAGCT TTGAGCAGGG TTTTGCCGTC
ACACTCCAGA TCGGTGAGGC TGGACAAATA CCCTTTTTGC AGGTGGCAGG ACGATTACCC
CCCGCTCCAG ATATCCCCAT CATCTATGCC CAGTGGCAAA CCAACTACCG TTCCCTGGGG
GGGCGATCGC GGATCCAGTT TCCTGATGCC CAGACCACCC ATGTGTCCTA TCGGGAGAAG
TGCCAGCAGG CGGCTCAAAC CCTTGAAAAA AGCTTGAATC AATGGCTGCG TTCAGAGGAG
TTTCAGCCGA TTCGAGAAAG TGTGATTGAG CATCTCAACC GCAATGATGC CCTCCAGTTG
TTTTTGCAGA TCCCCGAACT TTCCCTCCAG CGGTTGCCCT GGCATCTTTG TGAGCTGTTT
GAACGTTTTA CCAATACAGA AATTATCCTC AGTACCCTGA ACTATTGTTC CCCTAAGCCT
GCCCATCCTC CAGTGCTACT GAGAATTCTG GCCATCCTGG GCAATAGCGA TGGTATTGAT
TTGCAACCGG ATCAAACGTT GCTGCAGCAA CTGCCCAATG CTGTCGTGAC CTTGCTGGTT
AAACCTGCCC GCTGGCAAAT AAACGAACAA CTCTGGCAGC AACCCTGGGA TCTGCTTTTT
TTTGCAGGTC ATAGCCATAG TCAGGATAAT GTGGGGCGGA TCTGGATCAA TGACAGTGAA
GCCCTGACGA TCGCCGATCT CAAATTTGGC TTGCGGCTGG CGGTAAAGCA GGGTTTAAAG
CTGGCCATTT TTAATTCCTG TGATGGACTG GGACTGGCCT GTGCTCTGGC CGATCTGAAC
ATTCCCCAGG TGATTGTGAT GCGTGAGCCG GTTCCCGATC CAGTCGCCCA GGCGTTTTTA
CAGGGATTTC TCCATCACTT TTCTCGGGGG GATTCTTTCT ATCTCGCGGT GCGTAAAGGG
CGAGAGCAAT TGCAGGGTTT GGAAGGAGAG TTTCCCTGTG CCTCCTGGCT CCCCGTCATT
TGTCAGAATC CCGCCGCTCC CCCTCTGGTC TATCCCCACG CTTATCCCTG GCAGAGAGTC
GGACGTACAC TTCAGGGCCA CTCAACCGGA CTTGGTCTGG CGATCGGGGC GATCGGACTG
ATCGTTGCCG CTATCCTGGC CCTGCCAAAA CCTGTACTGC ACTCCCGCTT TAGCCTGGGT
GAACAGGTCT TAATTACGGC CAGCAGCACA ACCGAAAAAC AGGCAGGGGT AAAGGCCTTT
GCTACAGGGG AGTACCGCAG CGCGATCGCC CACTTCCAGG CTTCCTTGCA ACTGCAACCC
AACGACCCAG AAGCCCGCAT CTATCTCAAC AATGCCAGAG CTGCCCTGCA GGGAAACTTT
CACCGGATTG CAACCAGTGT GCCGATTGGT GGAAATCGCA ACAATGCGGA GGAAATTTTG
CGAGGCGTTG CCCAGGCTCA GGAGGAATTA CATCAGCGGG GGGGCATCCA GGGCAAATTC
CTTCAGATCA AAATTGCCAA TGACGATAAT GTACCGGAAC TGGCCAGCCA GGAGGTTGCT
CCCCGACTGA TCAAGGATGC TTCCATCCTG GCCGTGGTGG GACACAATGC CAGTGAGGTG
TCGATCGCCG CTGCCCCGGT TTATCAGACG GGTGGGCTGG TGATGATCTC TCCCACCAGT
GGCGCGCTGG AACTTTCAGG GATGGGTAAC TATATTTTCC GCACCGTCCC TTCTGTCTCC
TTTGATGCCA ATAAACTTGT CCGTTATGCC ATTGGCAAAG CTGGAAAAAC TAAATTTGCC
ACCTGTACCG ATTCAGCTTC TCCCTATAGC CTCTCTCTGC AACAGCAATT TATTCAAATG
GCGCTGGAAA ATGGGGGACA GGTCAGCCGA GTTCCTTGCG ATTTCTCCAG TCCTGAGTTC
AATGCCAGCC AGTTTGTTTC CCGAACCCTG GCGGATGGAG CCGATAGCCT GATGCTGATT
CCTTCGCCGT TACGGGTGGA ACAGGGGATC AACCTGATTC GCCGATTGCG GGGAAGATTG
TTCCTCCTGA GTGGGTCAAC GATGTACTCA ATCCGCACCC TACAACTGGG CCATGATGCC
GAAGGAATGA TCCTGGCAGT TGTTTGGTAT CCCAATAACC CTACAGGTAA GACCTTTGAG
ACTCGAGCGA TGCAACTCTG GGGGGGAATC GTTAACTGGC GGACTGCGAT GGCCTACGAT
GCGACCCAGG CCCTCATTAC CGCACTGCAG TCCACGGATA GCCGTAGTGG CATCCAAAAC
GTGCTGCACC GTAAAAGTTT TTCAGCCATG GGAGCCAGTG GGGCGGTGCA ATTTTTTCCC
TCTGGCGATC GCCGCCCGGT TGCCGATAAT GATCTGCTGG TTCAGGTTCA GTCTGTGCCT
GGTTCTGCCA ATGGCTACGA CTTTATTCCC CTGCGTCCCT GA
|
|---|
| Protein sequence | MSKWVVFKFG EGSFEQGFAV TLQIGEAGQI PFLQVAGRLP PAPDIPIIYA QWQTNYRSLG
GRSRIQFPDA QTTHVSYREK CQQAAQTLEK SLNQWLRSEE FQPIRESVIE HLNRNDALQL
FLQIPELSLQ RLPWHLCELF ERFTNTEIIL STLNYCSPKP AHPPVLLRIL AILGNSDGID
LQPDQTLLQQ LPNAVVTLLV KPARWQINEQ LWQQPWDLLF FAGHSHSQDN VGRIWINDSE
ALTIADLKFG LRLAVKQGLK LAIFNSCDGL GLACALADLN IPQVIVMREP VPDPVAQAFL
QGFLHHFSRG DSFYLAVRKG REQLQGLEGE FPCASWLPVI CQNPAAPPLV YPHAYPWQRV
GRTLQGHSTG LGLAIGAIGL IVAAILALPK PVLHSRFSLG EQVLITASST TEKQAGVKAF
ATGEYRSAIA HFQASLQLQP NDPEARIYLN NARAALQGNF HRIATSVPIG GNRNNAEEIL
RGVAQAQEEL HQRGGIQGKF LQIKIANDDN VPELASQEVA PRLIKDASIL AVVGHNASEV
SIAAAPVYQT GGLVMISPTS GALELSGMGN YIFRTVPSVS FDANKLVRYA IGKAGKTKFA
TCTDSASPYS LSLQQQFIQM ALENGGQVSR VPCDFSSPEF NASQFVSRTL ADGADSLMLI
PSPLRVEQGI NLIRRLRGRL FLLSGSTMYS IRTLQLGHDA EGMILAVVWY PNNPTGKTFE
TRAMQLWGGI VNWRTAMAYD ATQALITALQ STDSRSGIQN VLHRKSFSAM GASGAVQFFP
SGDRRPVADN DLLVQVQSVP GSANGYDFIP LRP
|
|---|
| |