| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_2070 |
|---|
| Symbol | |
|---|
| ID | 7287996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1963356 |
|---|
| End bp | 1964150 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643585066 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002482794 |
|---|
| Protein GI | 220907483 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0224916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTACACT CCAACGTTAC GCTCAAGCTT CTCCTGGGGG GACTCTTACT CACGGGTTGT
GCCAATTCTG CCGCAAACAG CCCTACCTCA ACCTCCTATA GCCCCGCCCT AGCTACAACT
ACGGCAAAAA ATAATTTGCC TGAGGGATCG GTGGCAAACG CCGAGTCCCA AAAGATTGCT
ATGGCTAATA ACCTGCTGGA GAAGGGTAAA AAAGCCCAGG AAAAAGGCCA GCACCAGGAA
GCGATCAAGG CTTTTCAGCG CTCCGTCAAG CTTAATCCTG ACAACCTCAG CGGCTATCAG
CTCCTCAGTG AGGCTCAGTT TCAGGCTGGG GAGCAGGAAG CGGCCATTGC TACGTTACAA
ACGGCTCTAA AGAGAAAGCC AAACGATATT GCTATGCTCA ATACGCTGGG GATGGCGTAC
CTCTCTAGCG ATCGGCTAAC GGAAGCAGAG CGGATCCTCA GTCAGGTGAC CGATCTGCAA
CCGAGCAACA AAACGGCCTA TTTCAGCCTC AGCCTGGTTC AGCAACGCTT ACGCCAATTT
GAGCGGGCGA TCGAGAATGC CCAACGCGCT GCCAAGCTAG AGCCAGAGAA CCCCCACCCC
CTGGTTGTGC TGGCCGTTAC GCAATGGGAT ATGGGCGATC AAACGAAAGC GGTACAGACC
TATAAGCAAG TGCTCAAAAA AGCCCCCCAG TACGGCAATC AAACCTATCT GATTTACCTG
AAACCAGAAG GGTTTAACGC TGACCAAATT CAGGTGGTCG AAGCGGTGCT CACTGCCACG
AAAAAGAAGT CATAA
|
|---|
| Protein sequence | MLHSNVTLKL LLGGLLLTGC ANSAANSPTS TSYSPALATT TAKNNLPEGS VANAESQKIA
MANNLLEKGK KAQEKGQHQE AIKAFQRSVK LNPDNLSGYQ LLSEAQFQAG EQEAAIATLQ
TALKRKPNDI AMLNTLGMAY LSSDRLTEAE RILSQVTDLQ PSNKTAYFSL SLVQQRLRQF
ERAIENAQRA AKLEPENPHP LVVLAVTQWD MGDQTKAVQT YKQVLKKAPQ YGNQTYLIYL
KPEGFNADQI QVVEAVLTAT KKKS
|
|---|
| |