| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1729 |
|---|
| Symbol | |
|---|
| ID | 7287653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1572168 |
|---|
| End bp | 1573118 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643584729 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002482459 |
|---|
| Protein GI | 220907148 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.18075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCACC GGATCGCTGA CCTTAGCCTT GATCCCTGGG GACTGGCTGT CAGCCCACAC
AATTTTGCTG AGCACCTCCA GGTCTTACGT CAGCAGGCCC ATCCCCTCAC TCTGGCTCAA
TTGGTGCAGG CTCATCAGCA GGGCCAGGTT CCCGATCGGG CGGTCGTACT TACCTTTGAT
GATGGCTACC TGGATAATTT TCAGACAGCC CTGCCTCTGC TGGAACAACA GGATATTCCC
GCCACCTGCT TCGTCACCAC TGGATATACC GGGCAAGGGC GAGAATTCTG GTGGGATGAA
CTGGCCCGCC TGCTTTTACA ACCGATCCAA CTGCCCCCAG AACTCACCCT CACCCTGGCA
GCCCAGACCC AAACGTGGCC CCTCGGCCCA GCCGCATCCT CTAGCCCCGC AACTCGGCAG
CAAGAGCGGC AGTACAAAGC CTGGGAGGCC CCTACAGGTT CCCGTCTGGC GTTTTACTAT
GCAGTTTGGT CGCAGTTACG TAGCCTTACT GATACACAAC AGCAGCAAGC CCTGGCCGAC
ATCCGCACCT GGACCGCAGC ACCCTCTTCC CCTGGACCTG AGGGTGGGAT GGCACTTGAA
CACCTGATTG CCCTCGATCG CGGCGGATTG ATCACGATCG GGGCCCATAC AGTCACCCAT
CCTCTCCTTT CCGCCCAGTC CCACGACCGC CAGCTTGAGG AAATCCAGGG CAGCAAACAG
ACTCTAGAAG ACTGGCTCAA TCATCCCGTC AGCTATTTTG CCTATCCCTT CGGCGACTAC
GGACCTGAAA CGGTGCGCTT AACTAGGGAA GCCGGGTTTG CCTGTGCCTG CACGGTGGAA
TCCCGACCCG CTTGGCGGGG GTGCGATCTG TTTGAATTAC CTCGGTTTGG GGTTGAGAAC
TGGAATGGGG AAGAGCTTGC CCAGCACTTG TCGAAATGGT TTTATTATTA G
|
|---|
| Protein sequence | MYHRIADLSL DPWGLAVSPH NFAEHLQVLR QQAHPLTLAQ LVQAHQQGQV PDRAVVLTFD
DGYLDNFQTA LPLLEQQDIP ATCFVTTGYT GQGREFWWDE LARLLLQPIQ LPPELTLTLA
AQTQTWPLGP AASSSPATRQ QERQYKAWEA PTGSRLAFYY AVWSQLRSLT DTQQQQALAD
IRTWTAAPSS PGPEGGMALE HLIALDRGGL ITIGAHTVTH PLLSAQSHDR QLEEIQGSKQ
TLEDWLNHPV SYFAYPFGDY GPETVRLTRE AGFACACTVE SRPAWRGCDL FELPRFGVEN
WNGEELAQHL SKWFYY
|
|---|
| |