Gene Cyan7425_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1712 
Symbol 
ID7287636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1551709 
End bp1552131 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content41% 
IMG OID643584712 
ProductNucleotide binding protein PINc 
Protein accessionYP_002482442 
Protein GI220907131 
COG category[R] General function prediction only 
COG ID[COG1569] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0042604 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGGTA AAGGGCGCTT TGTTTTTGAT ACAAATGTGA TCATCAGTGC ACTTCTGTTT 
GAAAATAGCA AACCTGCCCA GGTACTTCGC TATGCTCTAG CAAATGGTGA AGTGTTATTG
TCCCTTGAAT TGCTAGAAGA ATTGAACGAG GTTCTAAGGC GCGAAAGATT CAATCGGTAT
ATAACAAATG AAGAGCGTGA GGAATTTTTA GAAGCTTTAG TAGAACGGGC AGTTTTCGTT
GAAATAAATG AGAAGGTGCA AGCATGCCGT GATCCAAAAG ATGACAAGGT TTTGGAGGTG
GCATTAAATG GAGCAGCGCA GTATATTATC AGTGGTGATA GGGACTTGCT GGTATTACAC
TCCTTTCGCT CTATGGTAGT GATTACGGCA GATGAGTTCT TGAAATTACT TGAATCTGAG
TAG
 
Protein sequence
MMGKGRFVFD TNVIISALLF ENSKPAQVLR YALANGEVLL SLELLEELNE VLRRERFNRY 
ITNEEREEFL EALVERAVFV EINEKVQACR DPKDDKVLEV ALNGAAQYII SGDRDLLVLH
SFRSMVVITA DEFLKLLESE