Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1570 |
Symbol | |
ID | 7287493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 1415566 |
End bp | 1416270 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643584570 |
Product | chorismate mutase |
Protein accession | YP_002482301 |
Protein GI | 220906990 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0840576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000751534 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTCAGC CTGGATTGCT TTTTCTGCTG AGTTCAGCCT TGCTGTTATC GCCTGTTGAT GGGGTTCTAG CTGATGCCCT TGCTACCCCA CTCATTCATC AGGTTGAAAA TCCAGTTGCA CCGCTAGGGG AGAGGGAGCA AGCCTTACTC ATCGATCGCC TCCTAGATTT AATCCAACAA CGGTTGATGA TTCAGCATCA GGTGGCCCGC TGGAAGTGGA ATCAGCAAAA ACCGATCGAG GACCCGAAAC GGGAAGAGGC TTTACTTAAC CAGGTGGGGC AGCAGGCTAC TTTAAAGCAA ATTGATCCGC AATGGGCGAT CGCGTTCTTT CGCTGGCAGA TTCAGGCCGG TAAGTTAATC CAGATTGCTG ATTTTCAAAC CTGGCAGCAC CAGCAAATCG GTTCTTTCGC CAATGTGCCC GATCTAAATC AGACCTTACG CCCCCAATTG GATCAACTGA ATCTGGAATT GCTTCAAACC CTGGTCCAAC TCACCCCCAT CCTGGCCTGT CCGGCAACCC AAAAGTTGAT AGCAGAGCGA TCGCGATCGA TATTGCGGGG TGAAGGGATT GATGCCACTG TGCGACGAGT AGCTTTAGCT CCCCTGATGA CAGTTCAGTT ACCTGCTTCT AGGGATTGCT CACCCAGATT TAACACTAGA AAACTACAGG CAGCACCAGC GATTCATTCA CGCTTTGAGC AATAG
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Protein sequence | MLQPGLLFLL SSALLLSPVD GVLADALATP LIHQVENPVA PLGEREQALL IDRLLDLIQQ RLMIQHQVAR WKWNQQKPIE DPKREEALLN QVGQQATLKQ IDPQWAIAFF RWQIQAGKLI QIADFQTWQH QQIGSFANVP DLNQTLRPQL DQLNLELLQT LVQLTPILAC PATQKLIAER SRSILRGEGI DATVRRVALA PLMTVQLPAS RDCSPRFNTR KLQAAPAIHS RFEQ
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