| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1289 |
|---|
| Symbol | |
|---|
| ID | 7287210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 1126012 |
|---|
| End bp | 1126986 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643584293 |
|---|
| Product | Auxin Efflux Carrier |
|---|
| Protein accession | YP_002482027 |
|---|
| Protein GI | 220906716 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00114363 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTGC CGATCTGCTA CGCTGCTTTG CCCTCTGCGA TTGTGGATGA CCGGCTGGTC
AAACTCTATC TGTTTTTAGC AGCAGGAATT TTCACAGGTA TCCTGTTGGG GCGCTGGCAG
GGACCAAAAC TTGCTCCCCT CCTGGGCAAC TTTCTCTTCT GGATTGGGGC CCCCTTCACG
ATCGTGGTGT TTATGCAGGG GGTGAATTTA TCTGGTTGGG TCTGGCTGGT CCCGCTGGTC
TCCTGGGTGG TCATGGGACT AGGCATCCTT TTGGCCTGGA TCTGGCTGCA ATTCAGTGGT
CATTTCGGCT TGCATCAACC CCCCTGGCCC TCTGCTAGTC GGGGTAGTTT TCTGCTGGCT
GCCATGGCCG GAAATACAGG CTACCTGGGG TATCCGATCG TGCTGGCCCT GGCGGGGCGG
GAACATTTCC CCCTGGCTCT GTTCTACGAT TTACTTGGGA CGGCTGTGGG TACCTATGGG
CTGGGGGTGG CGATCGCTGC CTACTATGGC GGTCAGGTAC AAAGCAGTGG ACAGTTAGTT
TATTCTCTGC TCAAAAACCC GCCTCTCTGG AGTTTTCTGC TGGGCTTCCT GTTGCGCGCC
TATCCATTTA CCCCCCCAAT TCTGGAAGGC TTACAAGGGC TGGCCTGGGG GGTGATTTTT
TCCTCCCTGG TTTTGATTGG ACTGCGACTC AGCCAGGTCA CTCACGGGCA GGCATGGTCT
CAGGTTTTGC CCAGCTTGGC AATCAAAATG CTACTTTTAC CCCTGTTGGC GGGCTTGATC
CTGTCCGGGG TGGGGGTGAC AGGACTACCT CGATTAGTGC TGGTCTTGCA AATTGCCATG
CCCCCCGCCT TTTCCACCCT GGTGCTGGCG GAAGTTTACC AGCTGGATCG AGATCTGAGT
GTAACGACTC TGGTGGTTGG TTCGGCCAGC CTGCTGGTGT TATTACCCCT GTGGTTGGCC
TTGTTTGGCA CCTGA
|
|---|
| Protein sequence | MSLPICYAAL PSAIVDDRLV KLYLFLAAGI FTGILLGRWQ GPKLAPLLGN FLFWIGAPFT
IVVFMQGVNL SGWVWLVPLV SWVVMGLGIL LAWIWLQFSG HFGLHQPPWP SASRGSFLLA
AMAGNTGYLG YPIVLALAGR EHFPLALFYD LLGTAVGTYG LGVAIAAYYG GQVQSSGQLV
YSLLKNPPLW SFLLGFLLRA YPFTPPILEG LQGLAWGVIF SSLVLIGLRL SQVTHGQAWS
QVLPSLAIKM LLLPLLAGLI LSGVGVTGLP RLVLVLQIAM PPAFSTLVLA EVYQLDRDLS
VTTLVVGSAS LLVLLPLWLA LFGT
|
|---|
| |