| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1050 |
|---|
| Symbol | |
|---|
| ID | 7286969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 863382 |
|---|
| End bp | 865562 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643584061 |
|---|
| Product | DNA topoisomerase I |
|---|
| Protein accession | YP_002481797 |
|---|
| Protein GI | 220906486 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0550] Topoisomerase IA |
|---|
| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0690587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATC TCCTGATTGT TGAATCGCCC GGTAAGATCA ACAAGCTCAG AACTATCCTG
GGTTCCGGTT GGGAGGTCAA AGCTTCCGTT GGGCATATCC GGGAATTAGC CAATGATGGA
CCGGACTCAC TGGGATTTGA TTTAGGTCGC GATCGAATTG ACTGCCGCTA TATTCCTCGT
AATCCACGGG CTAAGCAGGC CATTGCGGCA CTCAAGCAAG CTGCTCGGCA GGCCCAATCC
GTATACTTGG CTTCTGACCC TGACCGGGAG GGAGAAACGA TCGCCTGGCA TATTGCGGAG
GTACTGGGCT TAAAGCAACC GCAACGGATC GTTTTTCAAG AAATTACAGC AACTGCGGTC
AGAACAGCGC TCTCCCGTCC CCGTCCCCTG GATTTGAATT TAGTTGCAGC AGGGCGTTGC
CGGGACTGTT TGGACAAACT GGTGGGTTAT AAGGGCAGCC CTCTGGTCTG GCGCTTGCAG
AATGGGGCCA AGAGTGTGGG GCGAGTTCAA TCTGCCACCC TCCACTTGCT CTGCTTGCGA
GAACGGGAAA TTAGCTCCTT TGTCCCCCAG ACCTATTGGT CCGTCTATGT TGATTATCAG
GAGGGGTTTA GAGCTTACTA CCATCACGCC AACCAGCCAC CGGACCCTAA GGCTAGTCCA
GAGGGAATAG ATGAGGCCGG TAGCCAGGAC AGCAATAAAG AATCTACGCG GGTGGTCAGC
CGGGAAGCAG CCGAACATCT CGTGGTAATA GCTCGTAGTC AGCCCCACCG GGTGCAGCAG
GTGAGCGGAC AAGTGACCAG CAAAAAGCCA CCCCCTCCGT TTATCACTTC TTCCCTCCAG
CAGGCGGCTG GGTCGCGTTT AAAGTTCAAC CCTGAATACA CGATGAGCTT GGCTCAGAAG
CTCTATGAGG CCGGGTTAAT TACCTATATG CGAACCGACT CCGTCCAGCT CAGCCCGGAG
TTTTGTACGG CAGCCCGCAG CTGGTTACAG GAGCATGATC CAGAGAATGT GCCCCAACGG
GTAGCCAGGC AGCGTAGTAG TAAAGCAGCC CAGGAAGGCC ACGAAGCCAT TCGCCCCACC
GATGTGTTCA AGTCCTCGGC AGAACTTCGA CTACAACTGG AAGACGATCA GTTCAAGCTG
TATGTCCTGA TCTGGACGCG GGCCATGGCC TCTCAGTGCA AGAGCGCCCA AATTCGCAAG
ACCCGGATTC TGAGCCAGTC CGGTAAGGTC CAGTGGCAGG CAACAGGACA GGTGATCGAG
TTTCCGGGAT ACACCAAATA CTGGAAGGAT ATCAGCGCTG ATCTGGTTCT CCCAGAGGTG
ACTGAAGGGC AACCCTTGCA CCTGGAGACG GCCCAGCATG AAGAGAAACA GACCCAACCC
CCACCCCGTT ATACCGAGCC GAAATTGGTC CAACTGATGG AGCGCAAGGG CATTGGACGG
CCCAGTACCT ACGCCCCCAC GATCGCCACG CTTAAGCAGC GCAACTATGT CCACCTGCTC
AAAGACAAGC TTCAGCCCAC GGATTTAGGA CTGCAAGTCG ATGCCTTTCT CGAAACGGCG
TTGCCTGATC TGCTTAAAGC TGAATTTACA GCCGCAATGG AGTCCTCCCT GGATGCGATC
GCCGAGGGAC AGCAGGAGTG GCAACGCTAC CTGATTGATT GGAACCATAC CTATTTTGAA
CCAGCCCTCC AAGCAGCTCT AAATCGGTTA CCCGAACATA AGGGCAATAC GGAGCGCAAA
CCCCTGGAAA AATCCCGGCT GAAGTGTCCC AAGTGCGGCC AGTCAATGGC GAAAGTCCCC
AGTCAAAAGG TCAGCAAAGG ATACTTTCTC AAATGCGAGG TCGGCTGCCA AACCGCCGCA
GGCAAAGCCA TGGTGATGTT TTGGTCAGCT CGAAGTAAGA AATGGCAACT GCCAGAACCT
CACACTGAAC CTCAGCAAGA AAATAGCGAT GCAAAGCGCC AGCAAGATCT ACAAACCAAG
CAACTGCCAG TTTTGACCGA ACATTTCTGT CCCGTGTGCA ACGCCTACTT GGAAGAATAT
ACCTATCAAA GGGAGGGGCA ATCAAAAAAG TTATTGCGAT GCTCCATTCC AGATCATCGT
CAAAGCAAGT GTAAAGAAGC CACCTATTTC CTGACTCGGC AGGGGGAATG GTGGAGTAAA
AAATTTGGCC AACTCGAATG A
|
|---|
| Protein sequence | MTNLLIVESP GKINKLRTIL GSGWEVKASV GHIRELANDG PDSLGFDLGR DRIDCRYIPR
NPRAKQAIAA LKQAARQAQS VYLASDPDRE GETIAWHIAE VLGLKQPQRI VFQEITATAV
RTALSRPRPL DLNLVAAGRC RDCLDKLVGY KGSPLVWRLQ NGAKSVGRVQ SATLHLLCLR
EREISSFVPQ TYWSVYVDYQ EGFRAYYHHA NQPPDPKASP EGIDEAGSQD SNKESTRVVS
REAAEHLVVI ARSQPHRVQQ VSGQVTSKKP PPPFITSSLQ QAAGSRLKFN PEYTMSLAQK
LYEAGLITYM RTDSVQLSPE FCTAARSWLQ EHDPENVPQR VARQRSSKAA QEGHEAIRPT
DVFKSSAELR LQLEDDQFKL YVLIWTRAMA SQCKSAQIRK TRILSQSGKV QWQATGQVIE
FPGYTKYWKD ISADLVLPEV TEGQPLHLET AQHEEKQTQP PPRYTEPKLV QLMERKGIGR
PSTYAPTIAT LKQRNYVHLL KDKLQPTDLG LQVDAFLETA LPDLLKAEFT AAMESSLDAI
AEGQQEWQRY LIDWNHTYFE PALQAALNRL PEHKGNTERK PLEKSRLKCP KCGQSMAKVP
SQKVSKGYFL KCEVGCQTAA GKAMVMFWSA RSKKWQLPEP HTEPQQENSD AKRQQDLQTK
QLPVLTEHFC PVCNAYLEEY TYQREGQSKK LLRCSIPDHR QSKCKEATYF LTRQGEWWSK
KFGQLE
|
|---|
| |