| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0535 |
|---|
| Symbol | |
|---|
| ID | 7286444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 341401 |
|---|
| End bp | 343065 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643583542 |
|---|
| Product | alpha amylase catalytic region |
|---|
| Protein accession | YP_002481287 |
|---|
| Protein GI | 220905976 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCG GATTTCAACT TTTTGCTCCC TATAACCAGG CGGTTTCACT GCTGGGCTGC
TTTTCTAAAT GGCGTGATAT TCCCATGCAG AAAGGCCAGG ATGGTTATTT TCGCACTGAA
GTTGAGTTAA GCGATGGCCT GTACGAATAC AAATTTCGGC TGCAGTCCCG CAGTCCCGAT
CGAGCCAAGC AGTGGGTAGA AGTGATTGAT CCCTATGCTA CGGATGTAGA TGAAGTCCGG
CATACAGGTC TGGTCAGGGT TAAAGATGGG CAACGTTTGG TCGATGATTA TGTCTGGGAG
TATGATCATG TTCCCTTACC CCAGAACTTT GAATTGATCA TTTATGAAAT GCATATTGCT
GACTTTTCTG GGGGGGAGGA TGACCCGGAA CGCCGTGGCA AATATCAAGA TGCGATCGCC
AAACTGGATT ATTTACAAGA TCTGGGAATT AATGCGATCG AACTCATGCC CGTGAATGAA
TATCCGGGGG ATTACAGTTG GGGTTATAAA GTTCGGCACT TTTTTGCCGC CGAATCCAGC
TATGGTTCAA CGGCGGATTT AAAACAATTT GTTGATCAAT GCCATGGGCG GGGAATACGG
GTGTTTGTGG ATGGCATTTA TAACCACACC GATGAAGAGT GCCCGTTGCT GTTGATCGAT
CGCAACACCT GGTACTACGA ACACAAGCAC TACCCAGAAG ATCCACAAAA CTACTGGGGA
CCGGAATTTA ACTATGATGC CTATGATGAA AAGTTAGACC TGCGCCCCGC CTGGAAATTT
ATCGGAGATG TGGTGCGCTA CTGGGTGAAG GAATATCATA TTGATGGCAT CCGTTATGAT
GCCGTGCGTC AACTGGCTAA TTTTGAATTT TTAGAATGGC TGGCCAGGGA AGCCAAAACT
GCAGCCGCAC CCAAACCCTT CTACAACATT GCTGAACACA TTCCTGATAC CCATAAAGTG
GTTGAACCCC AGGGGCCATT GGATGCCTGC TGGCACGAAA GTTTTCGCTA TTTTGTCCTG
CCCCACCTCT ACGGTGAAAT GTTTGATCTC GATCGCCTGA AGGAGGTTTT AGATCCCAAA
CGCCAGGGCT ATGGTACAGC CACCAATGTG ATTAATTATT TGGCCACTCA CGATCGGGAA
CGGCTGTTGC GAGAACTGGG CGATCGGGGC ATTTTTGATC AGGACGCCTT TGAACGGGCA
AAACTGGGGG CCACTCTTCT ACTCACCGCC GTGGGGATTC CGATGATCTG GATGGGAGAA
GAGTTTGGTG AACATAAACG CAAAAGTGAG AAAGTCACCC AACCGAAAAA GATTGCCTGG
CCGCTCCTGC AAAAAGAACT GAATCAAGAT CTATTTAACT ATTACCAATC CCTGATTCAG
CTCCGTAAAA CTAATCTGGC TCTACAGTCC GACAACATTG ATTTTATCCA TGAAGATTGT
GATGCAAAAG TCTTTGGCTA TCAGCGATGG CATGATCAGG GCGATCGGGT TGCCATTGTG
ATCAATTTTT CTGACCAACG ATTAGAGGGT TACAGGACCT CTAATTTTGC CACTGATCCT
TCATGGCTGG AATGGACGAC CCGTACCAAA GTTGAAATCA GGGATAATCA GATAGTTACA
GATCTGCAAC GGTGGTCAGC CAATATTTTC ATTAGTCAGA AATAG
|
|---|
| Protein sequence | MAIGFQLFAP YNQAVSLLGC FSKWRDIPMQ KGQDGYFRTE VELSDGLYEY KFRLQSRSPD
RAKQWVEVID PYATDVDEVR HTGLVRVKDG QRLVDDYVWE YDHVPLPQNF ELIIYEMHIA
DFSGGEDDPE RRGKYQDAIA KLDYLQDLGI NAIELMPVNE YPGDYSWGYK VRHFFAAESS
YGSTADLKQF VDQCHGRGIR VFVDGIYNHT DEECPLLLID RNTWYYEHKH YPEDPQNYWG
PEFNYDAYDE KLDLRPAWKF IGDVVRYWVK EYHIDGIRYD AVRQLANFEF LEWLAREAKT
AAAPKPFYNI AEHIPDTHKV VEPQGPLDAC WHESFRYFVL PHLYGEMFDL DRLKEVLDPK
RQGYGTATNV INYLATHDRE RLLRELGDRG IFDQDAFERA KLGATLLLTA VGIPMIWMGE
EFGEHKRKSE KVTQPKKIAW PLLQKELNQD LFNYYQSLIQ LRKTNLALQS DNIDFIHEDC
DAKVFGYQRW HDQGDRVAIV INFSDQRLEG YRTSNFATDP SWLEWTTRTK VEIRDNQIVT
DLQRWSANIF ISQK
|
|---|
| |