| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2359 |
|---|
| Symbol | |
|---|
| ID | 7286078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2839403 |
|---|
| End bp | 2840599 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643583182 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002480931 |
|---|
| Protein GI | 220905619 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.522134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCC TTACCCGCCA CCAGACCGAC AGAGTCGGCG TCTTCTACAT CCTCGGCAAG
CAACGCGCCA AGAGCAAAAC GCCTTCCGGC GAAGCCGTTC CCACCGAAAA GGCAGATAAA
ATCTATTATA TTATGTACCG CCTTGACGGG AAAAAGGTTG AAGAAAAGGT AGGGCGCGAG
TCTGAACGCA TGACCGTTGC CAAGGCCGCC AAGATACGTG AACAGCGGAT TAACGGAGTC
ACACTGCCCA ACACGGAACG CCGCCGTCAG CGCCTTGAGA AAGCTCAGGC AGAGGCCGGA
CGTTGGACAA TCGGCAAATT GTGGAAAGCC TACAAAGATA ACAACCCCGG CCTTAAAGGG
ATTGTCACCG ACGAGAACCG CTTCAAAAAC TACCTGAGCG GCTTTACAAA ATTATCACCC
GAAGAGCTGA CCACACAGAT GGTGGACACC TTGCGGCTGA AGCTCCTGAA GTCCGGCAAG
AAGGCCGGAA CTACCAAGAA TGTGTTGGAG CTTTTACGGC GTATTATCAA TTTTGGCGTC
AAAAAGGGGC TGTGCGCGTG GCAAGACCCG TCGCGTCTGC ACTTTGAGAT GCCCAAGCTG
AACAACGTCA AAACGGAAAT GCTGACCAAG GAAGAACGCG CCCGTTTCAT CGAAGCAGCA
AAAGCGGCCC CCAACCGCAA GGCCGGACAG CTTATGCTCA TGGCCTACTA TACCGGGATG
CGCCGCAATG AGCTTTTCGG CCTCAAATGG GCGCACATCG ACTTTGAGCA CGGTTTTATC
AATATCGTGG GTGAGAAGCA GGAAGGAGCC AAGAGCAACC GGGATGAACG CATTCCCCTC
AGCCCCCCGG TGCGTGAACT GCTGGCGGAA GTGGGGGACA ACGGCAGCGA GTATGTGTTT
CCCGGCAAGG ACGGGCGTAG CCGCATGATC GACATGAACA AGCAGGTGAA CGCCATTAAG
GCCGCCGCCG GACTGCCCAA GGATTTCCGG CCCCTGCACG GCTTGCGGCA TACCTTCGCC
AGCGTGGCAG TGTCCAATGG AGTTCCCCTC TCTCACGTCC AAAAGCTGCT GACTCACAAA
GACCCCACTT TGACGCAACG CTATGCGCAC TTGGAGGATG AGGCGTTGAA AAATGCGGCT
AATATGGTGG GTAATTTTCT CACTATCCCA GATTCAACAA AAATAGCTGG GGAATGA
|
|---|
| Protein sequence | MASLTRHQTD RVGVFYILGK QRAKSKTPSG EAVPTEKADK IYYIMYRLDG KKVEEKVGRE
SERMTVAKAA KIREQRINGV TLPNTERRRQ RLEKAQAEAG RWTIGKLWKA YKDNNPGLKG
IVTDENRFKN YLSGFTKLSP EELTTQMVDT LRLKLLKSGK KAGTTKNVLE LLRRIINFGV
KKGLCAWQDP SRLHFEMPKL NNVKTEMLTK EERARFIEAA KAAPNRKAGQ LMLMAYYTGM
RRNELFGLKW AHIDFEHGFI NIVGEKQEGA KSNRDERIPL SPPVRELLAE VGDNGSEYVF
PGKDGRSRMI DMNKQVNAIK AAAGLPKDFR PLHGLRHTFA SVAVSNGVPL SHVQKLLTHK
DPTLTQRYAH LEDEALKNAA NMVGNFLTIP DSTKIAGE
|
|---|
| |