Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_2289 |
Symbol | |
ID | 7286007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 2756605 |
End bp | 2758854 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643583112 |
Product | helicase, RecD/TraA family |
Protein accession | YP_002480862 |
Protein GI | 220905550 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00901153 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGACA TGCCCCTGCT GCAAGACCCG GATGCCGTGG AAATTTCCGG CACTGTGGAG CGCGTTATCT TTCATAATGA AGAAAACGGC TATACTGTAC TGCGTCTTAT GCCTGCCAGC GTCAACAGCG GCGGAGGCGA CGGCGGCCTC ACGCGCCCGC GCGACTCCGT AAGCTGCGTG GGTCACATGG TCAATCCGCA GGCGGGCGTA CAGATGAAAC TCGGCGGCCG TTGGGTCAAT AATACCCGTT TTGGCCGCCA GATAGAGTTC AGCCACGCTG AAGAAATGCT GCCTGCCACC AGTGAGGGCA TACGCCTGTA TCTGTCTTCA GGGCTTATCA AGGGCGTGGG CGAAGAGATG GCCTCGCGCA TCGTCAAGGC GTTCGGCACA GACACCATAC GGGTGCTGGA CGAAGAGCCG GAGCGCCTGC TCAAGGTGCG CGGCGTGGGG CAAAAAAGCC TGGAGCGCAT CCGCGCATCG TGGAGCGAAC ACCGCGGCAT ACGCGACCTG CTGCTTTTTC TGCAACCTCA CGGCATCACC CCGGCCTATG CTGTACGCAT CTACCGCGCC TACGGGGCGG ACGCCCTGGG CATCGTGCGT GAAAACCCCT ATCGCCTTGC CATGGATATC CACGGCATAG GCTTTGTCAC CGCCGATGCC GCGGCCCGCA AGCTGGGCTT CGAGCACGAC CACCCCTTGC GCGTACAGGC AGGCACACTC TACGTGCTGC AAAAAGCCAC GGATGACGGC AACGTGTACC TGCCGCAGAC CGCGCTTATG GAGGCCGTAT GCGCGCAACT GGGCGTTGAC GAGGACCTTG TTTCCGACGC TCTGGCCGCT CTTGAGGCGG ACGAGCGCAT CGTGCGCGAA GATATGGACA TGCCCGGCCC TGACGGCACA CAGCCTGAAA CAGGCGTGTA CCTGCGCCGC TATTTTCACT GCGAGTCCAA AACCGCGTTC TACCTGCAAC GGCTCATGCG TTCGCCCAAA TCCATTCGTT TTGAAAACCC CGACGCCCTG GTGGACAAGG TGGTGGGTGA ACTCAACATA TCCCTTGCGC CGGAACAGCT TGAGGCCGTG CGTACCTCGG CCCGCAGCAA GGTTATGGTG CTTACGGGCG GCCCCGGCAC AGGCAAGACC ACCATCATCA ATGCCATTAT CAGGCTTTTT GCCGAGGTGC GCGCCCGCAT CCTGCTGGCT GCGCCCACAG GACGCGCCGC CAAGCGTATG GCCGAAACCT CGGGGCGTGA ATCCCGCACC ATTCACCGCC TGCTGGAATA CAGCCCCAAG GAGGACGGCT TCGCCCGCAA CGAAGACAGT CCTCTGGCCT GCGGCCTGCT GGTGGTGGAC GAAGCCTCGA TGATGGACAC CCTGCTTTTT TACCACCTGC TCAAGGCCGT TCCCCTGGGC GCGACCCTTG TACTGGTGGG CGATGTGCAT CAGCTGCCCT CGGTGGGTCC GGGCAACGTG CTGGCCGACA TAATAGCCTC CGGTGTGGTT CCTGTGGTAG AGCTGACCGA AATATTCCGC CAGTCGGCAG AAAGTGAAAT TATCTGCAAC GCCCACCTTA TCAATCGCGG CGAGGTTCCT TCGCTGGAAT CCAGCAAAGA CCGCCTTTCG GACTTTTACT TCATCCACCA GAATGATCCG GAAAAAGCCG CCGACCTTAT GGTCGACCTG GTGCGCAACC ATATTCCGCG CCGCTTCGGG CTTGACCCGG TGGACGACAT CCAGGTGCTT ACCCCCATGC ACAAGGGAGC TGTGGGCGCG GGACATATGA ATACGCGCCT GCAGGAGGCC CTGAACCCCA ACGGCCTTGA AGTGCGGCGC GGCGAACGCG CCTTTCGCCT GCACGACAAG GTCATGCAGA TACGCAACAA CTACGATAAG GACGTGTTCA ACGGCGACAT GGGGCGGATC AGCTTTCTTG ACCTTGCCGA CCGCACCCTG AGCGTCACCT TTGACGAACG CGTGGTCCCC TATGAATTTG ATGAGCTGGA CGAGCTGGCC CCGGCCTACG CCATATCCAT TCACAAATCC CAGGGGTCGG AATATCCCGC CGTGGTCATA CCCATCATGA TGCAGCACTA CGTGCTGCTG CAACGCAACC TTATCTATAC CGGAGCCACG CGCGGCAAAA AGCTTGTCAT TCTGGTGGGC GAATCCCGCG CTCTCCACAT GGCGGTCAAA AACAACAAGA CCCGCAAGCG TTACACCCGG CTGGCCGAAC GGCTGGCTCC CGGCGAGTAA
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Protein sequence | MKDMPLLQDP DAVEISGTVE RVIFHNEENG YTVLRLMPAS VNSGGGDGGL TRPRDSVSCV GHMVNPQAGV QMKLGGRWVN NTRFGRQIEF SHAEEMLPAT SEGIRLYLSS GLIKGVGEEM ASRIVKAFGT DTIRVLDEEP ERLLKVRGVG QKSLERIRAS WSEHRGIRDL LLFLQPHGIT PAYAVRIYRA YGADALGIVR ENPYRLAMDI HGIGFVTADA AARKLGFEHD HPLRVQAGTL YVLQKATDDG NVYLPQTALM EAVCAQLGVD EDLVSDALAA LEADERIVRE DMDMPGPDGT QPETGVYLRR YFHCESKTAF YLQRLMRSPK SIRFENPDAL VDKVVGELNI SLAPEQLEAV RTSARSKVMV LTGGPGTGKT TIINAIIRLF AEVRARILLA APTGRAAKRM AETSGRESRT IHRLLEYSPK EDGFARNEDS PLACGLLVVD EASMMDTLLF YHLLKAVPLG ATLVLVGDVH QLPSVGPGNV LADIIASGVV PVVELTEIFR QSAESEIICN AHLINRGEVP SLESSKDRLS DFYFIHQNDP EKAADLMVDL VRNHIPRRFG LDPVDDIQVL TPMHKGAVGA GHMNTRLQEA LNPNGLEVRR GERAFRLHDK VMQIRNNYDK DVFNGDMGRI SFLDLADRTL SVTFDERVVP YEFDELDELA PAYAISIHKS QGSEYPAVVI PIMMQHYVLL QRNLIYTGAT RGKKLVILVG ESRALHMAVK NNKTRKRYTR LAERLAPGE
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