Gene Ddes_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2246 
Symbol 
ID7285963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2706253 
End bp2707059 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content64% 
IMG OID643583068 
Productsugar fermentation stimulation protein 
Protein accessionYP_002480819 
Protein GI220905507 
COG category[R] General function prediction only 
COG ID[COG1489] DNA-binding protein, stimulates sugar fermentation 
TIGRFAM ID[TIGR00230] sugar fermentation stimulation protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.325184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGC AGATTCCCCA CACGGCACAC CAGCCCCTGC TGCCCATGCC GCAGGGCTGC 
GTGATCGGCA GCTTTGTGCA GCGGCGCAAG CGCTTCAGCG TAGAACTGCG CGTCAACGGC
GGGGAGCTGT GGGTACACAG CAATAATTCC GGCAGCATGC TGGGCCTCAC CCGGCCGGGC
AATCCCGTTC TTGCTTCCCC GGCGGCCAAT CCTGCCCGCA AGCTCAAATA TACGCAGGAG
TGCGTATGGC TGCCCCAGAC GGCAACGCCC GCCGCCCCTG ATGCCCCTGC CGGCGCCGAT
CCATACGCCA GACCCGGCTT TTGGGTAGGT GTAAACACCA ATATGCCCAA CCGCATGCTT
GAGGCCGCCT TTCATGCCGG ACGCCTTGCC TTTGCGCAAG GCTACACCAG CCTTGTCCGC
GAGGCCAGAC GCGGGCAAAG CCGCCTGGAC GGATTGCTCA CAGGTCCCGG CCTGCCGCCC
CTGTGGGTGG AATGTAAAAA CGTCACCATG ATGGAAGACG ACGCCGCCTG CTTTCCTGAC
GCGGCCAGCG AACGCGGACA AAAACATCTG CGCGAGCTGA TGGACATTGT GGCCCAGGGC
GAACGGGCCG CCATGCTGTA CCTTGTGCAG CGCCCGGACG GCAGCTGTTT TGCCCCGGCG
GACTTTATCG ACCCGGAATA CGCGCGCCTT TTTTACGCCG CGCTAGCCTG CGGGGTGGAA
ATATACCCGT ACCGTGCTCT TGTGGATGTA GCGGGCATAG ACCTCGGCCC GCTCATTCCC
CTGCGCCCTG CGCCGCAAAA CGGCTAA
 
Protein sequence
MPKQIPHTAH QPLLPMPQGC VIGSFVQRRK RFSVELRVNG GELWVHSNNS GSMLGLTRPG 
NPVLASPAAN PARKLKYTQE CVWLPQTATP AAPDAPAGAD PYARPGFWVG VNTNMPNRML
EAAFHAGRLA FAQGYTSLVR EARRGQSRLD GLLTGPGLPP LWVECKNVTM MEDDAACFPD
AASERGQKHL RELMDIVAQG ERAAMLYLVQ RPDGSCFAPA DFIDPEYARL FYAALACGVE
IYPYRALVDV AGIDLGPLIP LRPAPQNG