Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_2178 |
Symbol | |
ID | 7285894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 2627782 |
End bp | 2629869 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643583000 |
Product | AsmA family protein |
Protein accession | YP_002480752 |
Protein GI | 220905440 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCT TTCTGCTCTG GACAATGGGT ATCGTGCTGG CAGCCGTTGC TGTTCTGGCC GTCATGCTCG GCCGGATGGA CACGGACTTC GTGATCCGGC AGATCGCCGA CGCCACGGCC GGGGCCACAG GCAAGCCCCT TGTGTTTGAA AGTTCGCCGA AAATATCCTT TTTTCCTCCC GGCGTCAGTT TTGGGCAGGC CCGGTGGGGA CAGGCGGAGC AGGACGACAG TCTTGCCGTT TCCGTCAAGG GCGGCATGGC CGAACTTGAA TTCATGCCGC TGCTGTCCGG CAATGTGGTC CTGCGCGAGG TCCGGCTGGA CAACCCCACG GTCACTGTGC GGCAAAACGC GCAGGTCATA AAAAACGGCA AACAGCCGAC AGATGCCGCA GCGGCTGAAA AGAATGCTGC GGCGGACAAC GGGAGCGCCA GAGAGAACAC CAGCCCCGCC AAAAGCGTAA AACCGGACGC CGCGCCCCGT GACGCCGCGC CGCCCGTCGA GCTTAAGCGT CTGGTCATAC GCCAGGGGTC TCTGAATATT ACCGATACGC AGGGGCAGGA CATCAAGATC AGTGACCTGA ATATTTCTGC AGAAAATCTG CGCCCGGAGC AGGAAACAAC TGCCAGGTGC GACTTTACCA TCGCCCTGGG CGACGCTCCG GGAACACCCG GGCATATCTC GGGCAACCTG GCCCTGTCGG CCAAGCTCCG CTATGCGCCA CCCATGCTCA CCCTGCGCCA GGCATCCCTG ACGTTCAACC CGCTTTCCGG CCCACTGCCC AAAGAAGCTG GCCCCCTGCA ACTCAATATT GAAGGCAGCC TGGACCTGAA CATCATGCGG ATGCGCGTGG ACAAGGGCTG GCTTGCCACG CCCCAGGCGC GCCTGGGCAT TCAGGGCGAG GCCGCATTCA GTCCTCCGGC CTTCACCGGC AATGCCGAAA TAGACGGCTC ACCCCGCAAG CTCGCGGCCA TGGCCGGGCT GAACCTCAAG CCCGTGGCGC AGGGCGTCAC AGACGGGCTG AACCTCAAGG CCCGGCTGGC CTACGGCAAT AACAGCCTCA ATCTTTCAGA TATTCACGCC CGCGTGGATG ACATCACCCT GCGCGGCCAG TTCCGCCTGG GCCTTGAGCC GGGCGCGCCT CTGTCCATAA CTGCCGATGT CCAGGTCGGC GCCATCAATC TGGATAATTA CCTGCCCCTG CCCGCAGCCC CAGCAAAAAA CAGCAAAACA GACGCAGCGC CCGCAAACGC AAGCACCGCC GCCAGCAAAA AAGAAAAAGG CGGGACAGGC AAAGCGCCCA TGCCGGACAT CAATATCCGT CTGGCCCTTG CGGGCCTGAA CAAGGACAAA CTTCAGCTCC GTGATATACA ACTGGCGGCG CAAGGCCTGC GGGGCAACTA CACCATCACC GCCCTTAACG CCATTCTCGG CAGCGGCGGC AAGGTGCGTG CCACAGGAGC CGCCCGGCTG GCCGACACCG CCAGCCCCGC CTATGCGATC AAAGGCACGG CCTCGGATAT AAATATGGGC AACCTGCTGG AAAGCCTCGG CAAAGGGCGC CCCCTGAGCG GTACGGCCCT GCTTGAGGCA GACCTGACCA TGGCCGGAAA AGACGTCACC GCCCTGCAAA ACAGCCTTTC CGGCAAAGGG CTGCTCGAAA TCCGCCGGGT GCGCCTGGAA TCCTTACCAA CCCTGCCCCA GAACATTCCC GGCCTTCAGG GGCGCGTACC CGACACTTTT GAACTGGTAC GCGCGCCCTT CACCGCGCGA AGCGGCGAAA TAAACGCCAA TCCGGTCAGT GCCAGCGCAC AGGGCCTCAA TGCACGGGGA CGCGCAGCCA TAAACCTGCC GCGCCAGCAC CTGGACGCCA CGGTCAACGT GGAGACACTG GGCATGACCA TACCGTTGAT CATTCGCGGG CCGTTCGACA ATATCTCGTA TTCTGCGGAT CCGCGCTTCG CTCTGGACGC CGCCAGCAAG CTGCCCGCCA TCTTGCAGGG CAAAACCTCA AAAAGCGGCA CAGACCCGCA GCGACAGGAC GACATGCGCG GCGCTGGGGA CCTTATACGG GGCCTTTTCG GACGCTGA
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Protein sequence | MKRFLLWTMG IVLAAVAVLA VMLGRMDTDF VIRQIADATA GATGKPLVFE SSPKISFFPP GVSFGQARWG QAEQDDSLAV SVKGGMAELE FMPLLSGNVV LREVRLDNPT VTVRQNAQVI KNGKQPTDAA AAEKNAAADN GSARENTSPA KSVKPDAAPR DAAPPVELKR LVIRQGSLNI TDTQGQDIKI SDLNISAENL RPEQETTARC DFTIALGDAP GTPGHISGNL ALSAKLRYAP PMLTLRQASL TFNPLSGPLP KEAGPLQLNI EGSLDLNIMR MRVDKGWLAT PQARLGIQGE AAFSPPAFTG NAEIDGSPRK LAAMAGLNLK PVAQGVTDGL NLKARLAYGN NSLNLSDIHA RVDDITLRGQ FRLGLEPGAP LSITADVQVG AINLDNYLPL PAAPAKNSKT DAAPANASTA ASKKEKGGTG KAPMPDINIR LALAGLNKDK LQLRDIQLAA QGLRGNYTIT ALNAILGSGG KVRATGAARL ADTASPAYAI KGTASDINMG NLLESLGKGR PLSGTALLEA DLTMAGKDVT ALQNSLSGKG LLEIRRVRLE SLPTLPQNIP GLQGRVPDTF ELVRAPFTAR SGEINANPVS ASAQGLNARG RAAINLPRQH LDATVNVETL GMTIPLIIRG PFDNISYSAD PRFALDAASK LPAILQGKTS KSGTDPQRQD DMRGAGDLIR GLFGR
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