Gene Ddes_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2172 
Symbol 
ID7285888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2618648 
End bp2619169 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID643582994 
ProductGtrA family protein 
Protein accessionYP_002480746 
Protein GI220905434 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.594384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAAAG GCTTGCGCCC GCCTGTTCCG GCGGATCTTG CCGCCTTTGT ACGGGCATTG 
CTGGCCCGCC GCTGGGTGCG TTTCGGCATG GTGGGCGGCG CCGCAACCCT GACGTATGCC 
CTTTTGGGGC TGTTTTTTGT CAGTATTCCG GGGATTCCTG TTCTGGCAGG CAATGCGCTG 
GCCTACGCCC TGAGCTTTGC CGTATCATAT CTTGGGCAGT GCCTCTGGAC GTTTCGTGCG 
GGCGGCACGG GCCGCGGACT TTCGCATCGG GGCATGCTGC CGCGCTTTGC TGCGACCCAG 
ACCCTCGGTC TTGGGCTGAA TTCCGCCATT ATCTGGGTGC TCATGCGCCT TGGGCTGGGC 
TACGAACTAG CCATGCCCGC TGCGGTACTG CTTGTGCCTG TCTTGGTCTA TTTTCTGTGT 
AAATACTGGG TGTTCCGGCA GCGGCCCCCC ATGGCAGCAT CCGTGTCGTC GCGCGGGCCG 
ACGCCGCCCG CTCAGCTCCC AAACAGTGAG GAAAAGCCAT GA
 
Protein sequence
MSKGLRPPVP ADLAAFVRAL LARRWVRFGM VGGAATLTYA LLGLFFVSIP GIPVLAGNAL 
AYALSFAVSY LGQCLWTFRA GGTGRGLSHR GMLPRFAATQ TLGLGLNSAI IWVLMRLGLG 
YELAMPAAVL LVPVLVYFLC KYWVFRQRPP MAASVSSRGP TPPAQLPNSE EKP